Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3643 ATGGAGAGAGATTTCATGGGTCTAAGCTCAAAAGAGCCACTTGTGGTCAAAGAAGAGATCAACGATGATGGCTCCAAAGATTCTGGCTTCACCAAGGGCTCTACTGCTCAGTGGCTTTTCTCAAGCAAAGTTTCTGCTGTTCCACACTTGATGTCTTTTAAGGTTTCTCAAGATGAGAAGCCTTTTGACTCCACTCTAAAGTTCCCTGCTCCTGAACTTCAGAAATCTTTCAATCACAATGGACAAGGTGGCTTTCATTTTTCCATGACTCCGTATCCTGTACAACATGATGTGAATTCTGTGAATCGTCCTCACGATGTGAAGATGTTTTCAGTTTCCAATCAAGCAATTTCAGTTTCTGTGGGGAATCCATACCTGAAGAATCACTTTGCATCGGCTGCTCAGAATATAGGCAGTGCTAATGTGAAGCAGACATTACTTGGGGGAATACCAATTACACCAACCATCGGTGCTGTTGCTGAACGCAATGTGAAAACAGCTCCATCTTCTGCACAACTTACAATCTTCTATGCGGGTACTGTTAATGTCTTCCAAGATATCTCTGCTGAAAAGGCACAAGCTATTATGTTGTTGGCTGGCAATGAGTTGGCACAGCCCAAGGTTCAGGCAGGTGGTTCAAAATTGGGAGCCGGTGATAGTGTGGCTGTTAATACACCACCTAGCTCCGGTGTTCCAAGTCCTTTATCCGTCTCATCGCATTCGGGTGCGCAGTCAGGGAGTGGCTCCACTAGTACTGATGAATTTCTGACTGCTAAAACGACCGGGGTTCCCACCGGTTCTGTTAGTAAGGTGGAGCCTCCGAAAGTAGTGAGCGCAACCACTATGTTGACTTCAGCTGTGCCACAGGCTCGTAAAGCATCGTTGGCTCGTTTTCTAGAGAAGCGCAAGGAGAGGGTGATGAATTCAGCACCATATAACCTGAACAAGAAGAGTGAGGAATATGGCACTGCAGAACACAATGGTGCTACCAGCATTGCTTCAAATGCTCTACCACTACAAGTGAAGCAAGGATAG 1035 0.4589 MERDFMGLSSKEPLVVKEEINDDGSKDSGFTKGSTAQWLFSSKVSAVPHLMSFKVSQDEKPFDSTLKFPAPELQKSFNHNGQGGFHFSMTPYPVQHDVNSVNRPHDVKMFSVSNQAISVSVGNPYLKNHFASAAQNIGSANVKQTLLGGIPITPTIGAVAERNVKTAPSSAQLTIFYAGTVNVFQDISAEKAQAIMLLAGNELAQPKVQAGGSKLGAGDSVAVNTPPSSGVPSPLSVSSHSGAQSGSGSTSTDEFLTAKTTGVPTGSVSKVEPPKVVSATTMLTSAVPQARKASLARFLEKRKERVMNSAPYNLNKKSEEYGTAEHNGATSIASNALPLQVKQG* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3643 344 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 12 331 IPR040390 -
Ahy3g3643 344 Pfam tify domain 168 200 IPR010399 -
Ahy3g3643 344 MobiDBLite consensus disorder prediction 218 254 - -
Ahy3g3643 344 Pfam Jas motif 288 312 IPR018467 -
Ahy3g3643 344 ProSiteProfiles Tify domain profile. 166 201 IPR010399 -
Ahy3g3643 344 MobiDBLite consensus disorder prediction 222 254 - -
Ahy3g3643 344 PANTHER PROTEIN TIFY 7 12 331 - -
Ahy3g3643 344 SMART tify_2 166 201 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3643 Ahy-Chr3 135763797 135766348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3643 38 318 Tify Gene Family AT3G17860 34.375 8.41e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Ahy3g3643 tify 2.10E-17 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3914 13 138580676 138583325 Ahy3g3643 3 135763797 135766348 hybridization