Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1475 ATGGCGAATAGGAATTTGGAGAAGATGGCATCAATTGATGCACAGTTGAGGCAATTGGCACCAGCAAAAGTGAGTGAGGATGATAAGCTTATTGAGTATGATGCTCTTCTTTTGGATCGCTTCCTTGATATTCTTCAAGATTTACATGGTGAAGATCTCAGAGAAACGGTTCAAGAAGTGTATGAGCTTTCTGCTGAGTATGAAGGCAAGCATGATCCTAAGAAACTTGAAGAACTTGGCAAAGTGATAACCAGTTTAGATGCCGGGGACTCTATCGTCGTAGCGAAGTCCTTCTCACATATGCTTAACCTTGCCAACTTAGCGGAAGAAGTTCAGATTGCTCATCGCCGAAGGAACAAGTTGAAGAAGGGTGATTTTGTGGATGAGAACAATGCAACCACTGAATCAGACATTGAAGAAACTCTCAAGAAACTTGTATTGAACCTGAAGAAGTCCCCTCAGGAAGTTTTCGATGCGCTGAAGAACCAGACAGTTGATCTGGTTCTTACTGCTCATCCTACTCAATCCATTCGTAGATCATTGCTTCAAAAGCATGGAAGGATCCGGAATTGTTTATCTCAGCTGTACGCCAAAGACATCACTCCTGATGATAAGCAGGAGCTTGATGAGGCTCTGCAGAGGGAGATTCAAGCTGCATTTCGAACGGACGAAATCAGGAGAACTCCTCCAACACCACAAGATGAGATGAGAGCAGGAATGAGCTACTTCCACGAAACAATTTGGATGGGCGTGCCGAAATTTCTGCGTCGGCTCGACACAGCTTTGAAGAACATAGGGATAAATGAGCGTGTACCTTACAATGCTCCTCTTATTCAATTCTCATCTTGGATGGGTGGTGATCGCGATGGTAATCCGAGAGTGACTCCTGAAGTGACAAGGGATGTTTGCTTACTAGCTAGAATGATGGCTGCTAATTTGTATTATTCCCAGATAGAAGATCTTATGTTTGAATTGTCTATGTGGCGCTGCAACGATGAGCTACGCGTTCGCGCGGACGAACTTCACGGATCATTCAAGAAAGATGAAGTTGCAAAACACTATATAGAATTTTGGAAAAAGATTCCGGCAAATGAACCGTATCGTGTGATACTGGGTGATGTGAGGGATAGACTGTACAAGACTCGGGAGCGGTCTCGCCATTTACTCGCTCAGGGTTACTCTGACATTCCAGAGGAAGCAACTTTCACCAATGTGGAGGAGTTCCTGGAGCCTCTTGAGCTATGTTACAGATCACTGTGTGCTTGTGGCGATCGCGCAATTGCTGACGGAACCCTTCTTGATTTCTTAAGACAAGTTTCCACCTTCGGACTGTCACTAGTAAGGCTTGACATCAGGCAAGAGTCGGACCGTCACACGGACGTGATGGATGCCATCACAAAGCATTTGGGAATCGGATCCTACCAGGAATGGTCGGAGGAGAAGAGACAAGAGTGGCTTCTAGAAGAATTAAGCGGGAAGCGACCGTTGTTTGGACCTGACCTTCCAACAACCGAAGAAATCAGAGACGTTCTGGACACATTTCATGTCATAGCAGAGCTTCCAGCAGATAACTTCGGAGCCTATATCATATCAATGGCAACCGCACCGTCCGATGTGCTGGCGGTTGAGCTTCTTCAACGCGAATGCCGGATCAGGCATCCGTTAAGAGTTGTCCCGTTGTTTGAGAAGCTCGCAGATCTCGAGGCTGCTCCGGCCGCCTTGGCTCGCTTGTTTTCGGTAGAATGGTATAGAAACAGGATCAATGGGAAGCAAGAAGTCATGATTGGGTACTCCGATTCCGGAAAAGATGCCGGAAGATTCTCTGCAGCATGGCAGCTGTATAAGGCTCAAGAGGATCTTATAAAGGTAGCCAAGAAGTATGGGGTCAAGCTAACAATGTTCCATGGTCGCGGCGGGACGGTTGGAAGAGGAGGCGGGCCTACTCACCTTGCTATCCTCTCCCAACCTCCGGACACTGTCCATGGATCACTTCGTGTCACGGTTCAGGGTGAAGTAATTGAGCAGTCATTCGGGGAGCAGCATTTGTGCTTCAGAACACTTCAAAGGTTCACTGCTGCCACCTTAGAGCACGGTATGAACGCCCCAATTGCACCGAAGCCAGAATGGCGTCAGCTTATGGATGAGATGGCCGTCATTGCCACAGAGGAGTACCGATCAATTGTGTTCAAGGAGCCACGATTCGTGGAATACTTTCGCCTAGCTACCCCGGAGTTAGAGTACGGAAGGATGAACATTGGAAGTAGACCAGCGAAGAGAAAGCCTAGTGGAGGCATTGAAACTCTGCGTGCAATTCCTTGGATCTTTGCGTGGACGCAGACAAGGTTTCATCTTCCGGTATGGCTAGGCTTTGGATCTGCATTTAAACATGTTATTCAGAAAGATGTTAGAAATCTCAACATGCTACAAGAGATGTACAACAATTGGCCTTTCTTTAGAGTCACCATTGATTTAGTGGAAATGGTGTTCGCCAAGGGCGATCCAGGTATCGCTGCTCTGAATGATAGGCTTTTGGTTTCTAAAGATTTATGGCCCTTTGGGGAGCAGTTGAGGAACAAATATGAAGAAACTAAGAAACTCCTCCTTCAGGTGGCTGGACACAAGGATCTTCTAGAAGGTGACCCCTACTTGAAGCAAAGGCTCCGGCTGCGTGATTCCTACATCACTACCCTGAATGTTTTCCAAGCTTACACATTGAAACGCATCCGCGATCCGAACTACAACGTGAATGTGAGGCCACGCCCACGAATATCTAAAGAATCATTAGACATCAGCAAATCGGCCGACGAATTAGTCTCGCTGAACCCAACAAGTGAATATGCTCCGGGTTTGGAAGACACCCTCATCCTCACCATGAAGGGTATCGCTGCCGGAATGCAGAACACCGGTTAA 2910 0.4704 MANRNLEKMASIDAQLRQLAPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLRETVQEVYELSAEYEGKHDPKKLEELGKVITSLDAGDSIVVAKSFSHMLNLANLAEEVQIAHRRRNKLKKGDFVDENNATTESDIEETLKKLVLNLKKSPQEVFDALKNQTVDLVLTAHPTQSIRRSLLQKHGRIRNCLSQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWMGVPKFLRRLDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFELSMWRCNDELRVRADELHGSFKKDEVAKHYIEFWKKIPANEPYRVILGDVRDRLYKTRERSRHLLAQGYSDIPEEATFTNVEEFLEPLELCYRSLCACGDRAIADGTLLDFLRQVSTFGLSLVRLDIRQESDRHTDVMDAITKHLGIGSYQEWSEEKRQEWLLEELSGKRPLFGPDLPTTEEIRDVLDTFHVIAELPADNFGAYIISMATAPSDVLAVELLQRECRIRHPLRVVPLFEKLADLEAAPAALARLFSVEWYRNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEDLIKVAKKYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTVHGSLRVTVQGEVIEQSFGEQHLCFRTLQRFTAATLEHGMNAPIAPKPEWRQLMDEMAVIATEEYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPAKRKPSGGIETLRAIPWIFAWTQTRFHLPVWLGFGSAFKHVIQKDVRNLNMLQEMYNNWPFFRVTIDLVEMVFAKGDPGIAALNDRLLVSKDLWPFGEQLRNKYEETKKLLLQVAGHKDLLEGDPYLKQRLRLRDSYITTLNVFQAYTLKRIRDPNYNVNVRPRPRISKESLDISKSADELVSLNPTSEYAPGLEDTLILTMKGIAAGMQNTG* 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1475 969 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 969 IPR021135 GO:0006099|GO:0008964|GO:0015977
Ahy18g1475 969 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 168 179 IPR018129 -
Ahy18g1475 969 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 969 - -
Ahy18g1475 969 Coils Coil 104 124 - -
Ahy18g1475 969 Hamap Phosphoenolpyruvate carboxylase [ppc]. 23 969 IPR022805 GO:0006099|GO:0008964|GO:0015977
Ahy18g1475 969 PRINTS Phosphoenolpyruvate carboxylase signature 591 611 IPR021135 GO:0006099|GO:0008964|GO:0015977
Ahy18g1475 969 PRINTS Phosphoenolpyruvate carboxylase signature 765 791 IPR021135 GO:0006099|GO:0008964|GO:0015977
Ahy18g1475 969 PRINTS Phosphoenolpyruvate carboxylase signature 633 662 IPR021135 GO:0006099|GO:0008964|GO:0015977
Ahy18g1475 969 PRINTS Phosphoenolpyruvate carboxylase signature 442 462 IPR021135 GO:0006099|GO:0008964|GO:0015977
Ahy18g1475 969 PRINTS Phosphoenolpyruvate carboxylase signature 167 180 IPR021135 GO:0006099|GO:0008964|GO:0015977
Ahy18g1475 969 PRINTS Phosphoenolpyruvate carboxylase signature 220 236 IPR021135 GO:0006099|GO:0008964|GO:0015977
Ahy18g1475 969 PRINTS Phosphoenolpyruvate carboxylase signature 280 295 IPR021135 GO:0006099|GO:0008964|GO:0015977
Ahy18g1475 969 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 33 969 IPR015813 GO:0003824
Ahy18g1475 969 Gene3D Phosphoenolpyruvate/pyruvate domain 308 445 - -
Ahy18g1475 969 Pfam Phosphoenolpyruvate carboxylase 35 969 IPR021135 GO:0006099|GO:0008964|GO:0015977
Ahy18g1475 969 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 593 605 IPR033129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1475 Ahy-Chr18 29479085 29484609 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1475 18 29479085 29484609 Ahy18g1475 18 29479085 29484609 ECH
Ahy18g1475 18 29479085 29484609 Ahy7g2094 7 78963940 78969366 hybridization
Ahy18g1475 18 29479085 29484609 Ahy3g1582 3 29080932 29088265 PCT