Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1383 ATGGCTGCAAGAGAAATCCTCCATAAGATGAAGGAAAAAGTTGGGCTGCGTTCATCGGAACCTGACTCAGGGAAAGGAAAGAGCAAGATTTCAAGGCGTGTAACTCATGGATTTCACTTAGTAAAGGGAAGATCATACCATGCCATGGAGGATTTTGTTGTTGCTGAATTTAAGCAAGTTGATAGCAATGAACTAGGCTTGTTTGCGATATTCGATGGCCATGCCGGTCACAATGTGCCTAATTACTTGCGGTCTCACTTGTTTGAAAACATCTTAAAAGAGCCTGACTTCTGGAAAGATCCTGAAAATGCTGTCAGGAGAGCCTATAGTATAACCGATTCTAGCATTTTGGAGAAATCAGGTGAACTGGGTAGAGGGGGTTCAACTGCTGTTACTGCAATATTGATGAATTGTCAGAAGTTAGTCATAGCTAATATTGGTGATTCTCGGGCCGTCTTATGCAAGAAAGGCCTTGCCAAACAACTATCGGAGGATCATGAGCCACACATAGAAAGTGAAGATATAAAAAATAGAGGTGGTTTTGTGTCAAAATTTCCAGGCGACGTTCCAAGGGTTGATGGCCGGTTGGCAGTATCAAGGGCATTTGGTGACAAAAGTCTGAAGAAACACTTGAGTTCAGAACCACATGTGACAGTGGAGCTTGTACAAGATGATGTAGAATTCCTCATATTAGCAAGTGATGGATTATGGAAGGTAATGACAAATCAAGAAGCAGTTAATACCATCAAAGACATAAAGGATGCTCGGTCTTCGGCGAAACGCCTTACTGAAGAAGCACTTAACAGGAAAAGCACAGATGATATATCCTGCATTGTTGTGAAATTTCAGTGA 852 0.4178 MAAREILHKMKEKVGLRSSEPDSGKGKSKISRRVTHGFHLVKGRSYHAMEDFVVAEFKQVDSNELGLFAIFDGHAGHNVPNYLRSHLFENILKEPDFWKDPENAVRRAYSITDSSILEKSGELGRGGSTAVTAILMNCQKLVIANIGDSRAVLCKKGLAKQLSEDHEPHIESEDIKNRGGFVSKFPGDVPRVDGRLAVSRAFGDKSLKKHLSSEPHVTVELVQDDVEFLILASDGLWKVMTNQEAVNTIKDIKDARSSAKRLTEEALNRKSTDDISCIVVKFQ* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1383 283 SUPERFAMILY PP2C-like 32 282 IPR036457 -
Ahy18g1383 283 SMART PP2C_4 25 280 IPR001932 -
Ahy18g1383 283 CDD PP2Cc 42 282 IPR001932 -
Ahy18g1383 283 Gene3D - 30 283 IPR036457 -
Ahy18g1383 283 ProSitePatterns PPM-type phosphatase domain signature. 67 75 IPR000222 GO:0043169
Ahy18g1383 283 PANTHER PROTEIN PHOSPHATASE 2C 1 283 IPR015655 GO:0004722|GO:0006470
Ahy18g1383 283 Pfam Protein phosphatase 2C 47 275 IPR001932 -
Ahy18g1383 283 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 283 - -
Ahy18g1383 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1383 Ahy-Chr18 26018298 26020698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1383 1 283 PP2C-type Phosphatase Gene Family AT3G15260 70.242 3.30e-158 440
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1383 18 26018298 26020698 Ahy18g1383 18 26018298 26020698 ECH
Ahy18g1383 18 26018298 26020698 Ahy8g1998 8 39926168 39928575 hybridization
Ahy18g1383 18 26018298 26020698 Ahy13g1920 13 32790226 32795719 PCT
Ahy13g1920 13 32790226 32795719 Ahy18g1383 18 26018298 26020698 PCT