Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0143 ATGGAGAAACCAGTGACAGTTGTTCCCATGGTTTCCTCAGAAGAAACTGCAGATCACAATGTTCCTTATGCTATACCACTGCAGAGAGCAAGTCCTCATAGTGATATTACAGAATCACAAGGGATTCATGGAGCTGAAACCTCTTCGTCCAAGCAAAAGGAAGAAACAAGTATTCCTTCTGCTGTGGCTCAAAACAAAGTGAAGGATTCTGATGTTACTGCTTCTGCATTGCAATCAGATCGACAACGAAGCACACACATTGCAGCATCAGTTGAAAAACTTGTGCAGAGCCCTGATACACCTTTCCGTGAAAAACGTCATCCATCACAATCTGGTCATGACAGTCCCTCAATAATACGTGAAAGGGTATCAAAAGATGGGTATAACTGGCGAAAATATGGCCAGAAAAATGTTAAAGGGAATGAATTTATAAGGAGCTATTACAAGTGTACGCATCCGAACTGCCAGGCAAAGAAACAGCTAGAGCAGTCAAACGATGGCCAGATCACAGATTCCATTTGCATTGGTCAGCATAATCATCCTAGGCCTCAATCCAACATCACAAAGCCTGTTGGTCCTGTTCTTCCTGTTCTTGAAGAAGGACTAGACAAGCCCCGTGTTGCCAATGTAGAAGTTGAAGACAAATCATTGAATGAGCATGCAAGTGTACCTCAACAGATGAAGTTTTCACACTCGCTTCAGATTACAAATGTTCCTGCAGCTGATCTGATGAAAGCTGCACATTCACAACTGACCACAGCAAATGACGAGGTTCACAACAATGACTATCCTGACTCAAAACGGCAGAGGATAGACGATAGTAATATTGAAGTCAGTGTAGCTGACAAGTCAACTTGTGCGTCTCGTGTTGTCGTTCAAACTTCAAGTGAGGTTGATTTTGTAAATGATGGGTACCGTTGGCGCAAATATGGTCAGAAACTAGTTAAAGGAAATGCAAATCCCAGAAGTTATTATCGATGCTCTAGTCCCGGATGCCCTGTCAAAAAGCATGTGGAAAGGGCCTCTCATGATTCAAAAGTTGTAATAACTACCTATGAGGGACAACATGATCATGAAATCCCGCCTGGAAGGACTGTCACTCATAATGCAGCTACAAATGCTCAAACAACAACCATTAATGGCAAGCCAGGAACCAATTCTGTATCAAATCCTGTTTCTACAGATACAAGAGGAAGCAGATCAAATGAGAAAGTAAATGGCAACTCAATTACTAAATCAGAGGCTGGTAAGAGTCCTGAAAGTAAATTAAATGGGCAACAACAACAAAAAAATGAAAATGCAGTTGCCAAACAGGATTATGTTGGTGCTAACATCACATGCCAATCAAATTCTGAAGATCCATGTCGATCAAAATCAAACGAACAGCCGAAAGATGACGTAGAAACTAAATCAGAAGGAAAGAACGGATCCCCTAATGTGGTTGTTGTTCATGATACTCCTGGTCAAGAAGGTCAACTCAAGAAGCAATCAGCATCTGATGCAGAAGCTGTCTAG 1515 0.4172 MEKPVTVVPMVSSEETADHNVPYAIPLQRASPHSDITESQGIHGAETSSSKQKEETSIPSAVAQNKVKDSDVTASALQSDRQRSTHIAASVEKLVQSPDTPFREKRHPSQSGHDSPSIIRERVSKDGYNWRKYGQKNVKGNEFIRSYYKCTHPNCQAKKQLEQSNDGQITDSICIGQHNHPRPQSNITKPVGPVLPVLEEGLDKPRVANVEVEDKSLNEHASVPQQMKFSHSLQITNVPAADLMKAAHSQLTTANDEVHNNDYPDSKRQRIDDSNIEVSVADKSTCASRVVVQTSSEVDFVNDGYRWRKYGQKLVKGNANPRSYYRCSSPGCPVKKHVERASHDSKVVITTYEGQHDHEIPPGRTVTHNAATNAQTTTINGKPGTNSVSNPVSTDTRGSRSNEKVNGNSITKSEAGKSPESKLNGQQQQKNENAVAKQDYVGANITCQSNSEDPCRSKSNEQPKDDVETKSEGKNGSPNVVVVHDTPGQEGQLKKQSASDAEAV* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0143 504 MobiDBLite consensus disorder prediction 376 504 - -
Ahy17g0143 504 MobiDBLite consensus disorder prediction 376 435 - -
Ahy17g0143 504 Pfam WRKY DNA -binding domain 125 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g0143 504 Pfam WRKY DNA -binding domain 302 359 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g0143 504 ProSiteProfiles WRKY domain profile. 296 361 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g0143 504 MobiDBLite consensus disorder prediction 442 456 - -
Ahy17g0143 504 ProSiteProfiles WRKY domain profile. 119 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g0143 504 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 11 471 IPR044810 GO:0003700
Ahy17g0143 504 MobiDBLite consensus disorder prediction 1 120 - -
Ahy17g0143 504 PANTHER WRKY TRANSCRIPTION FACTOR 1 11 471 - -
Ahy17g0143 504 MobiDBLite consensus disorder prediction 32 91 - -
Ahy17g0143 504 SMART WRKY_cls 124 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g0143 504 SMART WRKY_cls 301 360 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g0143 504 Gene3D WRKY domain 116 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy17g0143 504 MobiDBLite consensus disorder prediction 457 472 - -
Ahy17g0143 504 SUPERFAMILY WRKY DNA-binding domain 120 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy17g0143 504 SUPERFAMILY WRKY DNA-binding domain 293 361 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy17g0143 504 Gene3D WRKY domain 288 354 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0143 Ahy-Chr17 1555352 1560200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0143 110 375 WRKY Transcription Factor Family AT2G04880 50.735 1.03e-86 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy17g0143 WRKY 3.30E-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0143 17 1555352 1560200 Ahy17g0143 17 1555352 1560200 ECH
Ahy17g0143 17 1555352 1560200 Ahy7g0024 7 142604 146524 hybridization