Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4380 ATGGCTACTATGTCACTGTCGCTCTTTCATACTTCATTTCTTCACCAAAACCCTTCTCTCTGTTCCAAACGATCCCAATCCCCCCACTTAACCCTCATTCTCCGGAATCAACCCACTTCATCACTCAGTTTAAGTGTATCGGCAAAAAGGGAAAATGGGGTGGTTCCAAAAGCCACAGGGGGCGTATTGGAATCGAGTTCGAACTCACCCGTTTCTGCTAAGAACTCCACCAATCCGATTGTTGTGATTGACAACTATGACAGCTTTACCTATAACCTTTGCCAGTATATGGGGGAGTTGGGTTTCCAATTTGACGTGTACCGGAATGATGAGTTGACCGTGGAAGAGTTAAAAAAGAAAAATCCTAGAGGAGTGCTAATATCACCTGGTCCAGGCACGCCTCAAGATTCTGGAATATCTTTGCAAACTGTACTGGAACTTGGGCCAACTGTTCCTTTGTTTGGTGTATGCATGGGTTTGCAATGCATTGGAGAAGCTTTTGGAGGGAAAATTGTTCGATCTCCTCATGGTGTCATGCATGGGAAAAGTTCTTTGGTGTATTATGATGAAAAAGGAGAAGATGGATTATTTGCCGGATTATCAAATCCTTTCTTAGCTGGTAGATATCACAGCCTTGTGATCGAAAAGGAGAGTTTTCCTCATGAAGAACTTGAGGTGACAGCCTGGACTGAGGATGGTCTTATAATGGCAGCTCGTCACAAGAAGTATAAGCATCTACAGGGTGTGCAGTTTCATCCAGAGAGCATTATAACAACCGAAGGAAAGGAAATTGTTCGAAACTTTATCAAACTCATTGAGAGAAAGGAGGCTGGTGGTTCATGA 843 0.4342 MATMSLSLFHTSFLHQNPSLCSKRSQSPHLTLILRNQPTSSLSLSVSAKRENGVVPKATGGVLESSSNSPVSAKNSTNPIVVIDNYDSFTYNLCQYMGELGFQFDVYRNDELTVEELKKKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPHGVMHGKSSLVYYDEKGEDGLFAGLSNPFLAGRYHSLVIEKESFPHEELEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITTEGKEIVRNFIKLIERKEAGGS* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4380 280 SUPERFAMILY Class I glutamine amidotransferase-like 80 274 IPR029062 -
Ahy13g4380 280 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 152 168 - -
Ahy13g4380 280 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 122 136 - -
Ahy13g4380 280 PANTHER ANTHRANILATE SYNTHASE BETA SUBUNIT 1, CHLOROPLASTIC 8 277 - -
Ahy13g4380 280 PRINTS Glutamine amidotransferase superfamily signature 248 261 - -
Ahy13g4380 280 PRINTS Glutamine amidotransferase superfamily signature 125 134 - -
Ahy13g4380 280 PRINTS Glutamine amidotransferase superfamily signature 152 163 - -
Ahy13g4380 280 Pfam Glutamine amidotransferase class-I 81 269 IPR017926 -
Ahy13g4380 280 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 79 278 - -
Ahy13g4380 280 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 8 277 - -
Ahy13g4380 280 TIGRFAM trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 80 270 IPR006221 -
Ahy13g4380 280 CDD GATase1_Anthranilate_Synthase 80 269 IPR006221 -
Ahy13g4380 280 Gene3D - 78 271 IPR029062 -
Ahy13g4380 280 PRINTS Anthranilate synthase component II signature 248 261 - -
Ahy13g4380 280 PRINTS Anthranilate synthase component II signature 152 163 - -
Ahy13g4380 280 PRINTS Anthranilate synthase component II signature 125 134 - -
Ahy13g4380 280 PRINTS Anthranilate synthase component II signature 178 186 - -
Ahy13g4380 280 PRINTS Anthranilate synthase component II signature 80 94 - -
Ahy13g4380 280 PRINTS Anthranilate synthase component II signature 201 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4380 Ahy-Chr13 143513570 143517088 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4380 13 143513570 143517088 Ahy13g4380 13 143513570 143517088 ECH