Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3948 ATGCTTTTTTGGAGACCTGAACTGAGGAGACATGCTTTGCTTGAAGAATTTTGCAACTGCATTTCATTTCTTCTCAACATGAGCCGGCCCATGGAGGAAGATACTAGTAAGACTGAGGAAGAGGAGTTTAACACCGGTCCGCTGTCTGTACTCATGATGAGTGTTAAGAACAACACGCAGGTACTTATCAATTGCCGAAACAACAAAAAGCTTCTTGGTCGTGTTAGGGCTTTTGATAGACACTGCAATATGGTTCTTGAAAATGTACGGGAGATGTGGACTGAGGTGCCAAAGACTGGTAAAGGTAAGAAGAAGGCTCAGCCAGTCAACAAGGATAGATTCATCAGCAAAATGTTCCTCCGTGGAGATTCTGTCATCATTGTTCTTAGGAACCCTAAATAA 402 0.4279 MLFWRPELRRHALLEEFCNCISFLLNMSRPMEEDTSKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3948 133 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 27 133 - -
Ahy13g3948 133 Gene3D - 41 133 - -
Ahy13g3948 133 Pfam LSM domain 54 128 IPR001163 -
Ahy13g3948 133 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 27 133 IPR027248 GO:0008380|GO:0030532
Ahy13g3948 133 SUPERFAMILY Sm-like ribonucleoproteins 46 131 IPR010920 -
Ahy13g3948 133 SMART Sm3 51 130 IPR001163 -
Ahy13g3948 133 CDD Sm_D2 43 132 IPR027248 GO:0008380|GO:0030532
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3948 Ahy-Chr13 138849806 138852692 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3948 13 138849806 138852692 Ahy13g3948 13 138849806 138852692 ECH
Ahy13g3948 13 138849806 138852692 Ahy3g3674 3 136056589 136059434 hybridization