Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3930 ATGTCGTGGGAAGACGAGATTGTGATGCGTGATGTGACGAACGCGGGTCTCGTTGTCAGTGATCGCATTGGTCGCGAGGTTTCGTCTCAGCTTGACCTCGAAGAAGCTCTTGAAGCTTCAAGATATGCTAGCCACCCTTACTCCACTCTCCCCAGAGAGTGGCCCCCTTTAGTTGAGGTTGCCAATACATGGGAGTTGCCTCCTGTTCTCATTGAAAGATACAATGCAGCTGGTGGGGAAGGAACTGCCTTTTGTGGAATATTTCCTGAAATACGTAGGGCATGGGCATCTGTGGACAATTCCTTGTTTCTTTGGCGTTTTGATAAGTGGGATGGTCAATGTCCTGAATATAGTGGGGAAGAGCAAGCTATTTGTGCAGTTGGTCTTGCAAAATCAAAACCAGGTGTTTTTGTTGAAGCCATCCAATATCTTTTAGTTTTAGCAACGCCTGTTGAGTTGATTTTGGTAGGAGTGTGCTGCTCTGGAGGAGCCGATGGATCAGACCCATTTGCAGAAGTAACATTACAGCCATTGCCAGAGTATACTGTACCGTCTGATGGGGTTACAATGACTTGTGTGACATGTACTGATAAGGGCCGTATTTTCCTTGCTGGTCGTGATAGCCATATATACGAGCTTATTTATTCTACAGGTTCAGGATGGCAAAAGCGCTGCAGAAAAATCTGCCTCACTGCTGGCTTAGGAAGTTTAATTTCAAGCTGGGTTATACCAAATGTGTTCAACTTTGGAGCCATCGACCCCATTGTTGAAATGGTTTTTGATAATGAGAGGCAAATATTGTATGCACGAACTGAAGAGATGAAGCTTCAGGTTTATGTTCTAGGGCAAAATGGGGATGGTCCATTAAAGAAAGTTGCTGAAGAAAGGAATCTTGTTAATCAGAGGGATGGTCATTATGGAGGTAGACAATCAACAGGATCAAGAGTCTCAAATCGTTCACCCAAGCCATCTATTGTTTGTATTGCACCGTTATCCACACTTGAATCCAAGTTGCTGCATCTTGTTGCTGTTTTATCAGATGGCAGAAGGATGTACCTGTCTACTTCTCCTTCTAGTGCAAATTTGACTGGGTTCAGCACCAGTCATCACAGGCCTAGCTGTTTAAAGGTTGTTGCTACAAGGCCTGCTCCTCCTTGGGGTGTTAGTGGTAATCTCACATTTGGAGCCATAGCTCTTGCGTCTAGGCCTCAAAATGAGGATCTCTCATTGAAAGTTGAGGCAGCATATTGTTCTGCAGGAACTCTTATCCTTTCTGATGCATCACCTTCAGCTATGCCTTCTCTCCTTGTATTGAACCGGGATTCAAGCACCCAGTTATCACCATCAGGTAATCTTGGGACAAATTCAAGGAGTTCCCGTGCATTACGAGAATCTGTATCTTCTTTACCAGTTGAAGGGCGAATGCTTTCTGTGGCAGATGTCTTACCTTTGCCTGATACTGCATCTACTGTGCAGTCTTTATATTCAGAAATTGAGTTCAGTGGTTATGAGAGCCCAATGGAATCATGTGACAGGGTATCTGGGAAACTCTGGGCAAGGGGAGACCTTTCGACTCAACATATATTGCCAAGAAGGAGGATTGTTATCTTCAGCACAATGGGCATGATGGAAATTGTGTTAAACAGGCCACTGGACATTTTAAGAAGGTTATTAGAGTCCAGCTCTCCAAGATCAGTTTTAGAAGATTTCTTCAATCGTTTTGGTGCTGGTGAGGCAGCTGCTATGTGTCTAATGCTAGCTGCAAGAATAGTGCACTCGGAAAACCTTATTAGCAATGTTATTGCCGAGAAGGCTGCTGAAGCTTTTGAGGATCCAAGAGTTGTTGGAATGCCACAACTTGAAGGTAGTAGTGCATTATCAAACACAAGAACTGCTGCTGGTGGATTTAGCATGGGCCAGGTTGTTCAGGAGGCTGAGCCAGTATTTTCAGCCGCACATGAAGGACTCTGTTTGTGTTCATCTAGATTACTTTTTCCTCTTTGGGAACTTCCTGTGATGCTTGTGAAAGGTAATTTAGCCCCTTCAGGTGCTTTATCTGAAAATGGGGTAGTTGTCTGCAGACTCTCTGTTGGTGCTATGCAAGTCCTTGAACACAAAATCCGATCTTTAGAAAAATTCTTAAGATCTAGAAGGAACCAGAGGAGAGGACTTTATGGATGTGTTGCAGGTTTGGGCGATCTAAGTGGTTCAATTCTATATGGTACTGGTTCAGCATTAGGTGCAGGTGATCGAAGTATGGTGAGAAACTTATTTGGTGCGTACTCCAGAAATGTGGAGTCTAATGGTGGTGGAACAAGTAACAAAAGACAAAGGCTGCCATATAGTCCTGCAGAATTAGCTGCCATGGAGGTGAGGGCAATGGAATGTATTAGGCAGTTGCTTCTTAGATCTGGTGAAGCGCTGTTTTTGCTTCAACTTATTTCCCAGCATCATGTCACTCGATTGATTCAAGGATTTGATGCTAACCTTCAACAAGCATTAGTTCAGTTAACATTTCATCAGTTAGTTTGTTCTGAGGAGGGTGACCGGCTTGCTACGAGACTTATTTCTGCTCTAATGGAGTATTATACTGGTCCTGATGGTAGGGGAACTGTAGATGACATTAGCAGGAGATTAAGAGAGGGTTGTCCAAGCTACTATAAGGAGTCTGATTACAAGTTTTTCTTAGCTGTGGAAGCTCTGGAGAGAGCTGCTGTGACTATAGATGATGAGGAAAAGGAGAATCTTGCAAGAGAAGCATTTAATTGCTTAAGCAAAGTTCCAGAGTCTGCAGACTTACGAACTGTTTGCAAGCGTTTTGAGGATTTGAGATATTATGAAGCTGTAGTGCGCTTACCTCTTCAAAAGGCACAAGCTATCGATCCTGCAGGTGATGCTTATAATGATGAAATTGATGCAAGTGTCAGAGAACAGACACTTGCTCAGCGCGAACAGTGTTATGAGATAGTTATTAGTGCTTTACGGTCTCTGAAAGGTGACAACTCTCATAAGGAATTTGGCTCTCCTATCAGATCTGCTGCTTTGCAATCTACCCTTGATCCAGCTTCTCGAAAAAAATATATTAGTCAAATTGTTCAACTTGGTGTCCAGTCTCCTGACAGAATTTTCCATGAGTATCTATACCAAGCTATGATTGATTTAGGTCTTGAAAATGAGTTGTTAGAGTATGGAGGTCCTGATCTGTTGCCCTTTTTGCAAAGTGCGGGTCGTAAACCCATCCAAGAGGTTCGTGCTGTGACTGCAACAACTTCTCCAACTGGGCAATCTGGAGCACCTATGTCATCCAATCAAGTCAAGTACTATGAACTTTTGGCACGGTATTATGTCTTGAAGCGGCAACATATGCTTGCAGCTCATGCATTGCTAAGACTAGCTGAACGACGTTCTGTTGATGGGGTTCCTACTCTTGAACAGAGGTGTCAATACCTAAGTAATGCAGTTCTACAAGCAAAAAGTGCAGCTAATAGTGATGGTTTAGTAGGTTCTGCTCGGAGTTCCATTGATAGTGGATTCTTAGATTTGCTTGAAGGGAAGCTTGCTGTTCTTCGGTTTCAGATAAAGATCAAAGAGGAATTGGAGGCAATGGCTTCCAGGAATGAGATTTTACCTAGCACATCTGATTCCATTCAAGATGGTGCAGTCCATGTGGGCAGTTCAACTGCCGATGCAAATTTTGCAAGCGTAGCACGAGAGAAGGCCATGGAGCTATCATCAGATGTAAAGAGCATAACACAATTATATAATGAATATGCTGTTCCCTTTGAACTCTGGGAGATATGCCTGGAGATGCTGTACTTTGCCAATTATTCTGGTGATGCTGACAGCATAATTGTCAGAGAGACATGGGCTAGACTTATTGATCAAGCTCTTTCAAGAGGTGGCATTGCTGAAGCTTGCTCGGTATTGAAGAGGGTTGGCCCCCGGATTTATCCTGGTGATGGAGCTGTTATACCACTCAACACTATTTGTCTTCACCTAGAGAAGTCTGCACTGGAGAGGTTAAACTCGGGGGCTGAATCTGTTGGTGATGAAGATGTTGCTAGAGCCCTTCTTTCTGCTTGCAAGGGTGCAGCTGAGCCTGTATTGAATACATATGACCAATTGTTATCAAATGGAGCTGTGTTGCCCTCCCCAAATCTTAGATTACGCATGCTGAGATCAGTCCTTGTGGTTCTTCGCGAGTGGGCAATGTCTGTATATTCACAGAGAATGGGTGCAAGTGCCTCCGGTTCTTCCCTCATACTAGGTTCAGGATTCCCACTTGAAAGAACAATTGTTAGCCAAGGAATTCGTGATAAGATCACAAGTGCGGCAAACAGGTACATGACTGAAGTGCGAAGGTTAGCCCTTCCCCAGAATCAAACAGAACATGTCTACCGAGGCTTTAGAGAACTCGAAGAGTCGCTTATAAGTCCCCAATCATTTGATCGATATTGA 4458 0.4372 MSWEDEIVMRDVTNAGLVVSDRIGREVSSQLDLEEALEASRYASHPYSTLPREWPPLVEVANTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYSGEEQAICAVGLAKSKPGVFVEAIQYLLVLATPVELILVGVCCSGGADGSDPFAEVTLQPLPEYTVPSDGVTMTCVTCTDKGRIFLAGRDSHIYELIYSTGSGWQKRCRKICLTAGLGSLISSWVIPNVFNFGAIDPIVEMVFDNERQILYARTEEMKLQVYVLGQNGDGPLKKVAEERNLVNQRDGHYGGRQSTGSRVSNRSPKPSIVCIAPLSTLESKLLHLVAVLSDGRRMYLSTSPSSANLTGFSTSHHRPSCLKVVATRPAPPWGVSGNLTFGAIALASRPQNEDLSLKVEAAYCSAGTLILSDASPSAMPSLLVLNRDSSTQLSPSGNLGTNSRSSRALRESVSSLPVEGRMLSVADVLPLPDTASTVQSLYSEIEFSGYESPMESCDRVSGKLWARGDLSTQHILPRRRIVIFSTMGMMEIVLNRPLDILRRLLESSSPRSVLEDFFNRFGAGEAAAMCLMLAARIVHSENLISNVIAEKAAEAFEDPRVVGMPQLEGSSALSNTRTAAGGFSMGQVVQEAEPVFSAAHEGLCLCSSRLLFPLWELPVMLVKGNLAPSGALSENGVVVCRLSVGAMQVLEHKIRSLEKFLRSRRNQRRGLYGCVAGLGDLSGSILYGTGSALGAGDRSMVRNLFGAYSRNVESNGGGTSNKRQRLPYSPAELAAMEVRAMECIRQLLLRSGEALFLLQLISQHHVTRLIQGFDANLQQALVQLTFHQLVCSEEGDRLATRLISALMEYYTGPDGRGTVDDISRRLREGCPSYYKESDYKFFLAVEALERAAVTIDDEEKENLAREAFNCLSKVPESADLRTVCKRFEDLRYYEAVVRLPLQKAQAIDPAGDAYNDEIDASVREQTLAQREQCYEIVISALRSLKGDNSHKEFGSPIRSAALQSTLDPASRKKYISQIVQLGVQSPDRIFHEYLYQAMIDLGLENELLEYGGPDLLPFLQSAGRKPIQEVRAVTATTSPTGQSGAPMSSNQVKYYELLARYYVLKRQHMLAAHALLRLAERRSVDGVPTLEQRCQYLSNAVLQAKSAANSDGLVGSARSSIDSGFLDLLEGKLAVLRFQIKIKEELEAMASRNEILPSTSDSIQDGAVHVGSSTADANFASVAREKAMELSSDVKSITQLYNEYAVPFELWEICLEMLYFANYSGDADSIIVRETWARLIDQALSRGGIAEACSVLKRVGPRIYPGDGAVIPLNTICLHLEKSALERLNSGAESVGDEDVARALLSACKGAAEPVLNTYDQLLSNGAVLPSPNLRLRMLRSVLVVLREWAMSVYSQRMGASASGSSLILGSGFPLERTIVSQGIRDKITSAANRYMTEVRRLALPQNQTEHVYRGFRELEESLISPQSFDRY* 1486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3930 1485 Gene3D Nucleoporin, helical domain, central subdomain 1057 1154 IPR042537 -
Ahy13g3930 1485 Pfam Non-repetitive/WGA-negative nucleoporin C-terminal 874 1292 IPR007187 -
Ahy13g3930 1485 PANTHER BNAC05G49530D PROTEIN 2 1482 - -
Ahy13g3930 1485 MobiDBLite consensus disorder prediction 443 464 - -
Ahy13g3930 1485 Gene3D - 531 883 - -
Ahy13g3930 1485 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP155 2 1482 IPR004870 GO:0005643|GO:0006913|GO:0017056
Ahy13g3930 1485 Pfam Nup133 N terminal like 54 507 IPR014908 -
Ahy13g3930 1485 Gene3D - 1180 1419 IPR042538 -
Ahy13g3930 1485 Gene3D - 894 1054 IPR042533 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3930 Ahy-Chr13 138701536 138709245 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3930 13 138701536 138709245 Ahy13g3930 13 138701536 138709245 ECH
Ahy13g3930 13 138701536 138709245 Ahy3g3658 3 135894481 135901716 hybridization