Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3928 ATGATGGAGTCTTCGAAGGCTCTGCGGTTCATAACACACCAATCGTTGTTCTCGACCGTTCGATCTGGAGACCTTGATGAGCTGAAGAAGCTGGTGGAGCAGCTGAGAAAGGAAGAGTCTTGTTCTTGTGCTTCAGATGCATCATCTTCATCGATTTCTGACGTGATGTCCCTTCAGAACGATGCTGGAGAAACCGCTCTTTACATCGCCGCCGATAATAATCTGAAGGACGTGTTCAGCTTCTTGCTCAAACTCTGTGACTTCGAGATAGTGAAGATCAGGTCCAAGTCTGACATGAACGCCTTTCATGTTGCAGCCAAGCGTGGTCATCTTGATATTGTGAGGGAGTTTTTGAGTACTTGGCCAGAGCTTTGTAAGTTATCTGACTCATCAAACACCAGCCCGCTATATTCGGCTGCTGTTCAAGATCATCTGGATGTGGTCAATGCTATCTTGGAAGTCGACGCCAGTTCCATGATGATAGTTAGGAAAAATGGGAAAACTTCCCTGCACAATGCTGCTAGGTATGGTATGGTTCGAATTGTGAAAGTTCTTATTGCCCGGGATCCAGCAATAGTCTCCATCAAAGATAAAAAAGGTCAAACTGCACTTCACATGGCTGTCAAAGGACAGTGTAGTGCAGTGGTGGAGGAGATATTACAAGCTGATCCAACTATACTGAACGAACGGGACAAGAAAGGCAATACAGCTCTTCACATGGCTACGAGGAAAGGCCGTGAGCAGATTGTGACCCTTTTGCTATGCTATACCGCCATGGAAGTTAACGCCATCAATAAGCAGCAGGAAACAGCTTTGGATTTGGCAGATAAGCTGCCGTATGGAGATCCGTCTTTGGTAATTAAGGAAGCCCTTGCAGAGTATGGTGCCAAGCATGCCAGGAATGTCGGAAAAATAGATGAAGCCATGGAACTCAAAAGAACTGTCAGTGACATAAAACATGAGGTGCAGTCACAACTTATACAAAATGAAACTACTCGTAGACGAGTTTCTGGAATTGCCAAGGAACTGAAGAAACTTCACAGGGAAGCAGTTCAGAACACCATTAATTCTGTCACAGTCGTAGCTGTCCTTTTTGCCTCAATAGCATTCCTGGCCATATTCAATTTGCCTGGTCAGTATATAACAGGAGGATCAGATGCAGGGAAGGCCAATATTGCCAATCGTCTCGGCTTCAAAGTTTTCTGCCTTCTGAATTCTACATCTCTCTTCATCTCACTTGCAGTCGTCGTAGTTCAAATCACTTTAGTAGCATGGGACACAAGGGCTCAAAGGCAGGTTGTATCAGTGGTTAACAAGCTAATGTGGGCTGCATGTGCTTGCACATGTGGTGCTTTTCTTGCAATAGCTTTTGAGGTTGTTGGAGAACACACATGGATGGCCTTGACCATCACCATTTTGGGAGTACCAATTCTAGTTGGAACACTAGCAAGCTTGTGCTACTTTGTTTTTCGACAACATTTTGGTGTTTTCCGCAGCGATTCACAGAGGCGAATCAAGAGAGCTAGCGGAAGCAAATCTTTTTCATGGTCGTACTCTGCAAATATATCAGACTTGGACGAATATAATTCCGACATTGAAAGGATCTATGCTCTGTGA 1617 0.4471 MMESSKALRFITHQSLFSTVRSGDLDELKKLVEQLRKEESCSCASDASSSSISDVMSLQNDAGETALYIAADNNLKDVFSFLLKLCDFEIVKIRSKSDMNAFHVAAKRGHLDIVREFLSTWPELCKLSDSSNTSPLYSAAVQDHLDVVNAILEVDASSMMIVRKNGKTSLHNAARYGMVRIVKVLIARDPAIVSIKDKKGQTALHMAVKGQCSAVVEEILQADPTILNERDKKGNTALHMATRKGREQIVTLLLCYTAMEVNAINKQQETALDLADKLPYGDPSLVIKEALAEYGAKHARNVGKIDEAMELKRTVSDIKHEVQSQLIQNETTRRRVSGIAKELKKLHREAVQNTINSVTVVAVLFASIAFLAIFNLPGQYITGGSDAGKANIANRLGFKVFCLLNSTSLFISLAVVVVQITLVAWDTRAQRQVVSVVNKLMWAACACTCGAFLAIAFEVVGEHTWMALTITILGVPILVGTLASLCYFVFRQHFGVFRSDSQRRIKRASGSKSFSWSYSANISDLDEYNSDIERIYAL* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3928 538 ProSiteProfiles Ankyrin repeat region circular profile. 165 186 - -
Ahy13g3928 538 Gene3D - 11 316 IPR036770 -
Ahy13g3928 538 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 4 538 - -
Ahy13g3928 538 ProSiteProfiles Ankyrin repeat profile. 233 254 IPR002110 GO:0005515
Ahy13g3928 538 PANTHER ANKYRIN REPEAT PLANT-LIKE PROTEIN 4 538 - -
Ahy13g3928 538 SMART ANK_2a 131 161 IPR002110 GO:0005515
Ahy13g3928 538 SMART ANK_2a 62 92 IPR002110 GO:0005515
Ahy13g3928 538 SMART ANK_2a 199 228 IPR002110 GO:0005515
Ahy13g3928 538 SMART ANK_2a 97 126 IPR002110 GO:0005515
Ahy13g3928 538 SMART ANK_2a 165 194 IPR002110 GO:0005515
Ahy13g3928 538 SMART ANK_2a 233 263 IPR002110 GO:0005515
Ahy13g3928 538 Pfam Ankyrin repeats (3 copies) 197 263 IPR002110 GO:0005515
Ahy13g3928 538 Pfam Ankyrin repeats (3 copies) 67 154 IPR002110 GO:0005515
Ahy13g3928 538 Pfam Domain of unknown function 349 456 IPR026961 -
Ahy13g3928 538 SUPERFAMILY Ankyrin repeat 16 278 IPR036770 -
Ahy13g3928 538 ProSiteProfiles Ankyrin repeat region circular profile. 233 254 - -
Ahy13g3928 538 ProSiteProfiles Ankyrin repeat profile. 165 197 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3928 Ahy-Chr13 138690290 138692956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3928 6 538 Miscellaneous Gene Families AT2G01680 70.149 0.0 749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3928 13 138690290 138692956 Ahy13g3928 13 138690290 138692956 ECH
Ahy13g3928 13 138690290 138692956 Ahy3g3656 3 135882958 135885758 hybridization