Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3919 ATGGGTTCCGAAGGATCAAGTGTTGTTGTTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAATTGGAGATGGAACTGTAAGCTATGGAATGGATGATGCTGATGATATCTACATGCAATCATGGACTGGGACAATTATAGGTCCCCCTGGTACTGTCCACGAAGGGCGTATCTACCAATTGAAATTGTTTTGTGGTAAGGATTATCCAGACAATCCACCATCTGTTAGATTTCAGACAAGGATTAACATGACTTGCGTCAACCAAGAGACTGGAGTGGTTGAACCACAATTGTTTCCCATGCTTGCTAATTGGCAAAGAGAGTGTACGATGGAAGACATTTTATTGCAATTGAAGAAAGAAATGTCGTCTCCACAGAACAGGAAGCTAGCTCAGCCTCCTGAAGGAAACGAAGAAGGAAGGATTGATCAGAAGGGGCTGGTGGTGAAATGTTGTATTGTGTAA 480 0.4271 MGSEGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPGTVHEGRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNQETGVVEPQLFPMLANWQRECTMEDILLQLKKEMSSPQNRKLAQPPEGNEEGRIDQKGLVVKCCIV* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3919 159 Pfam Ubiquitin-conjugating enzyme 41 136 IPR000608 -
Ahy13g3919 159 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 159 IPR000608 -
Ahy13g3919 159 SUPERFAMILY UBC-like 9 142 IPR016135 -
Ahy13g3919 159 Gene3D Ubiquitin Conjugating Enzyme 2 144 IPR016135 -
Ahy13g3919 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 8 144 - -
Ahy13g3919 159 SMART ubc_7 14 158 - -
Ahy13g3919 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1A-LIKE 8 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3919 Ahy-Chr13 138618964 138621798 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3919 13 138618964 138621798 Ahy13g3919 13 138618964 138621798 ECH
Ahy13g3919 13 138618964 138621798 Ahy3g3647 3 135816622 135819375 hybridization