Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3914 ATGGAGAGAGATTTCATGGGTCTAAGCTCAAAGGAGCCACTTGTGGTCAAAGAAGAGATCAACGATGATGGCTCCAAAGATTCTGGCTTCACCAAGGGCTCTACTGCTCAGTGGCTTTTCTCAAGCAAAGTCTCTGCTGTTCCACACTTGATGTCTTTTAAGGTTTCTCAAGATGAGAAGCCTTTTGACTCCACTCTAAAGTTCCCTGCTCCTGAACTTCAGAAATCTTTCAATCACAATGGACAAGGTGGCTTTCATTTTTCCATGACTCCGTATCCTGTACAACATGATGTGAATTCTGTGAATCGTCCTCACGATGTGAAGATGTTTTCAGTTTCCAATCAAGCAATTTCAGTTTCTGTGGGGAATCCATACCTGAAGAATCACTTTGCATCGGCTGCTCAGAATATAGGCAGTGCTAATGTGAAGCAGACATTACTTGGGGGAATACCAATTACACCAACCATCGGTGCTGTTGCTGAACGCAATGTGAAAACAGCTCCACCTTCTGCACAACTTACAATCTTCTATGCGGGTACTGTTAATGTCTTCCAAGATATCTCTGCTGAAAAGGCACAAGCTATTATGTTGTTGGCTGGCAATGAGTTGGCACAGCCCAAGGTTCAGGCAGCTGGTTCAAAGTTGGGAGCCGGTGATAGTGTGCCTGTCAATACACCACCTTGCTCCGGTGTTCCAAGTCCTTTATCCGTCTCATCACATTCCGGTGCGCAGTCAGGGAGTGGCTCCACTAGTACTGATGAATTTCTGACTGCTAAAACGACCGGGGCTCCCACCGGTTCTGTTAGTAAGGTGGAGCCTCCAAAAGTAGTCAGCGCAACCACTATGTTGACTTCAGCTGTGCCACAGGCTCGTAAAGCATCGTTGGCTCGTTTTCTAGAGAAGCGCAAGGAGAGGGTGATGAATTCAGCACCATATAACCTGAACAAGAAGAGTGAGGAGTATGGCACTGCAGAACACAATGTTGCTACCAGCACTGGTTCAAATGCTCTACCACTACAAGTGAAGCAAGGATAG 1035 0.4638 MERDFMGLSSKEPLVVKEEINDDGSKDSGFTKGSTAQWLFSSKVSAVPHLMSFKVSQDEKPFDSTLKFPAPELQKSFNHNGQGGFHFSMTPYPVQHDVNSVNRPHDVKMFSVSNQAISVSVGNPYLKNHFASAAQNIGSANVKQTLLGGIPITPTIGAVAERNVKTAPPSAQLTIFYAGTVNVFQDISAEKAQAIMLLAGNELAQPKVQAAGSKLGAGDSVPVNTPPCSGVPSPLSVSSHSGAQSGSGSTSTDEFLTAKTTGAPTGSVSKVEPPKVVSATTMLTSAVPQARKASLARFLEKRKERVMNSAPYNLNKKSEEYGTAEHNVATSTGSNALPLQVKQG* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3914 344 PANTHER PROTEIN TIFY 7 12 330 - -
Ahy13g3914 344 MobiDBLite consensus disorder prediction 214 271 - -
Ahy13g3914 344 MobiDBLite consensus disorder prediction 230 267 - -
Ahy13g3914 344 SMART tify_2 166 201 IPR010399 -
Ahy13g3914 344 Pfam tify domain 168 200 IPR010399 -
Ahy13g3914 344 Pfam Jas motif 288 312 IPR018467 -
Ahy13g3914 344 ProSiteProfiles Tify domain profile. 166 201 IPR010399 -
Ahy13g3914 344 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 12 330 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3914 Ahy-Chr13 138580676 138583325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3914 38 318 Tify Gene Family AT3G17860 33.750 2.78e-28 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Ahy13g3914 tify 3.90E-17 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3914 13 138580676 138583325 Ahy13g3914 13 138580676 138583325 ECH
Ahy13g3914 13 138580676 138583325 Ahy3g3643 3 135763797 135766348 hybridization