Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1920 ATGACTGGCAGAGAAATCCTCCACAAGATGAAGGAAAAAGTGTTGGGGTCATCAGATCCTGATTCAGGGAAAGGAAAGAGCAAGATGTCTAAGAACATAACTCATGGCTTCCATTTGGTAAAGGGAAGATCAGATCATGCTATGGAAGACTATCTTGTTGCTCAATTTAAGCAAGTCGAAAATAATGAGTTGGGTTTGTTTGCAATATTTGATGGCCACTCTGGTCACAGTGTACCTGATTACTTGCGGTCTCATTTGTTCGATAACATCATAAATGAGCCTGACTTCTGGACAGACGCTGCTAATGCTGTGAAGAGAGCCTATAGTGTAACTGATTCTACTATTTTGGAGAAATCAGGTGAATTGGGCAGAGGGGGTTCAACTGCTGTTACAGCAATATTGATTAATTGTCAGAAGCTAATAGTGGCTAACATTGGGGACTCTCGGGCTGTCTTATCGGTGAATGGCAAGGCCAAACAACTATCTGTGGATCATGAACCAAACACAGAATGGGAGGACATCAAGAACAGAGGTGGTTTCGTTTCTAACTTCCCAGGGGATGTTCCACGGGTTGATGGGCAATTGGCAGTGTCGAGGGCATTCGGTGACAAAAGCCTGAAGAAACACTTGAGCTCTGATCCATATGTGACAGTGGAGCTCATAGGTGATGGTGCAGAGTTTATCATATTAGCCAGTGATGGTTTATGGAAGGTAATGTCAAATCAAGAAGCAGTTGATGCTATCAAAGACATAAAAGATGCTCGGTCTGCAGCAAAACACCTTACTGAAGCAGCAGTTAACAGGAAAAGCTCAGATGATATCTCTTGTGTTGTTGTGAGATTTCAGTGA 849 0.4287 MTGREILHKMKEKVLGSSDPDSGKGKSKMSKNITHGFHLVKGRSDHAMEDYLVAQFKQVENNELGLFAIFDGHSGHSVPDYLRSHLFDNIINEPDFWTDAANAVKRAYSVTDSTILEKSGELGRGGSTAVTAILINCQKLIVANIGDSRAVLSVNGKAKQLSVDHEPNTEWEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKKHLSSDPYVTVELIGDGAEFIILASDGLWKVMSNQEAVDAIKDIKDARSAAKHLTEAAVNRKSSDDISCVVVRFQ* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1920 282 Gene3D - 16 282 IPR036457 -
Ahy13g1920 282 SUPERFAMILY PP2C-like 30 281 IPR036457 -
Ahy13g1920 282 Pfam Protein phosphatase 2C 45 274 IPR001932 -
Ahy13g1920 282 PANTHER PROTEIN PHOSPHATASE 2C 1 282 IPR015655 GO:0004722|GO:0006470
Ahy13g1920 282 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 282 - -
Ahy13g1920 282 CDD PP2Cc 35 281 IPR001932 -
Ahy13g1920 282 SMART PP2C_4 24 279 IPR001932 -
Ahy13g1920 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1920 Ahy-Chr13 32790226 32795719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1920 1 282 PP2C-type Phosphatase Gene Family AT3G15260 74.394 3.67e-159 442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1383 18 26018298 26020698 Ahy13g1920 13 32790226 32795719 PCT
Ahy8g1998 8 39926168 39928575 Ahy13g1920 13 32790226 32795719 PCT
Ahy13g1920 13 32790226 32795719 Ahy18g1383 18 26018298 26020698 PCT
Ahy13g1920 13 32790226 32795719 Ahy8g1998 8 39926168 39928575 PCT