Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1314 ATGGGTTGTTTCTCTTTTCTTTGCTCTAAAAAAGGATCTTCCTCAGCCACACAACCATCCGAAGCCGATATAATAGATATTTCGAACTTTCAGAATGTCAATCTTTACACTTACAAGGAACTGCGAATTGCCACCGAGAATTTTAGTCCAGCAAAGAAGATAGGGGAGGGCGGTTTCGGATCAGTCTATAAGGGAAAGCTCAGAAATGGTACTCTAGCTGCTATAAAGGTTTTGTCAGCAGAATCTAGCCAAGGGGTCCGCGAGTTCTTAACAGAAATCAAGGTGATCACAAGTATAGAGCATGAGAATCTAGTTAAGTTGTATGGATGCTGTGTGGAAAGAAACCAAAGGATTTTGGTATATGGCTATCTTGAGAATAACAGTCTAGCACAAACACTTCTTGGTGGAGGCCATAGTAACTTGCAATTTGATTGGCGAACGCGGAAGAACATCTGCATCGGTGTTGCCCGGGGTCTTGTATTCCTTCATCATGAAGTTGTGCCGCATATTATTCATAGAGACATTAAAGCAAGCAACATATTACTTGACAAAGACCTCCAGCCCAAAATTTCGGATTTCGGCTTAGCAAGGCTTATTTCAACAAACCAGACCCACGTTAGTACACTTGTTGCGGGTACAGCTGGCTATCTGGCACCTGAGTATGCAATACGAAGTCAAGTGACTAGAAAATCAGATGTCTACAGTTTTGGAGTTCTGCTACTAGAAATCCTTAGTGGGAGGTGCAACACAAACAGACGTCTACCTGCCGAAGAACGGTATCTTCATACAAAGGCATGGGATTTGTACGAGAAGGGAGAGCTAGAGAATTTGGTGGATGCCTTGCTAAACCGAGACTTTGACATCGAGGAGGCAATAAGATTTTGTAAGATTGGCCTTCTCTGTATTCAGGATTCTGTTCAGCTCCGGCCTTCTATGTCAACTGTGCTCGACATGCTGATAGGTGATGCAGATGTGAATGAGAAGAAGATGACAAAACCCGGCTTACTATTCGAATTCGATGATGCCAAAGACCAAAGGAAACAAAAGGACAAGGCTGAAGTGGAAAATACATCTATATTGGCTAGTTCAGGGAAGCAAGATAATGATTCATTGCTATCTGGAAGCACGAGCTCTTTCGCCACCATGACCTTCAGTTCAATTTACGACCGAACCAATTGA 1179 0.4292 MGCFSFLCSKKGSSSATQPSEADIIDISNFQNVNLYTYKELRIATENFSPAKKIGEGGFGSVYKGKLRNGTLAAIKVLSAESSQGVREFLTEIKVITSIEHENLVKLYGCCVERNQRILVYGYLENNSLAQTLLGGGHSNLQFDWRTRKNICIGVARGLVFLHHEVVPHIIHRDIKASNILLDKDLQPKISDFGLARLISTNQTHVSTLVAGTAGYLAPEYAIRSQVTRKSDVYSFGVLLLEILSGRCNTNRRLPAEERYLHTKAWDLYEKGELENLVDALLNRDFDIEEAIRFCKIGLLCIQDSVQLRPSMSTVLDMLIGDADVNEKKMTKPGLLFEFDDAKDQRKQKDKAEVENTSILASSGKQDNDSLLSGSTSSFATMTFSSIYDRTN* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1314 392 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 376 - -
Aev10g1314 392 MobiDBLite consensus disorder prediction 347 370 - -
Aev10g1314 392 MobiDBLite consensus disorder prediction 355 370 - -
Aev10g1314 392 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Aev10g1314 392 SMART serkin_6 48 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev10g1314 392 Gene3D Transferase(Phosphotransferase) domain 1 124 333 - -
Aev10g1314 392 PANTHER RECEPTOR-LIKE KINASE 3 376 - -
Aev10g1314 392 CDD STKc_IRAK 54 319 - -
Aev10g1314 392 SUPERFAMILY Protein kinase-like (PK-like) 26 319 IPR011009 -
Aev10g1314 392 Gene3D Phosphorylase Kinase; domain 1 19 123 - -
Aev10g1314 392 Pfam Protein kinase domain 51 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev10g1314 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Aev10g1314 392 ProSiteProfiles Protein kinase domain profile. 48 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1314 Aev-Chr10 16672351 16675010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1314 36 341 Receptor kinase-like Gene Family AT1G56120 53.896 1.41e-103 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aev10g1314 Pkinase 4.3e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1314 10 16672351 16675010 Aev10g1314 10 16672351 16675010 ECH