Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2270 ATGGTTTTGTCATGGACAAGAGGTAGAGTTTTCCGGCGAGCAAGAAAAGACAAAGATCTTCAAGTTAATGACTTGGAGGTAGAAATTGCTATCCCTTCCCACTTCCGGTGTCCGGTAACCCTCGACCTTATGAAGGACCCTGTAACGGTCTCTACAGGTATCACCTACGACCGAGACAGCATCGAAAAGTGGTTAGAAAACGGGAACAACACGTGCCCGGTCACCAAGAAACCCTTATCACCGTTCGATATGATCCCAAACCACTCAATCAGGAGACTGATCCAAGATTGGTGCGTCGAGCACCGTTCATTTGGGATCGAGAGGATCCCTACTCCGCGCATCCCTGTTACACCCTACGAAGTTTCCGATACGTGTAAGAAGATCGTGATCGCCGCAGAAAATGGCGACGAGAGCGTTTGTAGGGTTTTGGTGAGGAAGATTAAGGGTTGGGCGAAGGAGAGTGAGAGGAACAAGAAGTGTATTGTTGCGAACGGTTCTCAGATTGCGATGGTCAACGCGTTTGACTCTTTCTCATCTTGTGGGTTCGTTGATGAGGAGAGGAATTTGTGTGTTTTGGAGGAGATTTTGGGGGTGATGACGTGGATGCGTCCTATTGGTGAGGAAGGAAAGTCAATTCTTGGGTCAAAGGGTTCGATCATGAGTTGCTTGGTTTGGTTCTTGTTGAATGGGAAGGATCTTGCATCGAAACAGAGTGTTGCTCTGTTATTGAAGGAATTGCCGATTGGGGTTTTGGAGAAGACACAAGGTGTTGTTGAAGGTTTGGTTAAATTGGTTAAGGAACCAATTGGGGGTACTAATTCTTCAACCATGAAGGCTTGTTTGTCTATGATTTTTCAATTGGTTAGTTTTTCTAAAGATAGGGATTTGATTTCAGAGAGATTTGTGGAATTGGGTTTGGTTGAGGCTTTGTTGGATACACTTGTTGAATGCGACAAAGGTGTTTGTGAAAAGGCCTTAGGTGTTTTGGACTCAATTTGTGGTTTTAAAATTGGGAAGGAAGTTGCTAAGGCTAATGCTCTTACACTTCCTCTTGTGATTAAGAAGCTGTTGAGGGTTTCTGAGCTGAGTTCTTGTTTTGCTGTTTCGATTCTTTGGAAGATTTGTGATAATAGGAATGATGATGATGAAGAAAAAGGGGTTTTTGTTGAGGCACTTCAAGTTGGTGTTTTTCAGAAGCTACTTGTTCTTTTGCAAGTTGGGTGTGGTGAGAGCACAAAGGAGAAAGCTACAGAGTTGTTGAAGTTGTTGAATGGTTATAGGACCAAAGCTGAGTGTGTTGATTCTTCATCTTTGGATTTTCAGCACCTTAAGAAGCCATTCTAG 1344 0.4368 MVLSWTRGRVFRRARKDKDLQVNDLEVEIAIPSHFRCPVTLDLMKDPVTVSTGITYDRDSIEKWLENGNNTCPVTKKPLSPFDMIPNHSIRRLIQDWCVEHRSFGIERIPTPRIPVTPYEVSDTCKKIVIAAENGDESVCRVLVRKIKGWAKESERNKKCIVANGSQIAMVNAFDSFSSCGFVDEERNLCVLEEILGVMTWMRPIGEEGKSILGSKGSIMSCLVWFLLNGKDLASKQSVALLLKELPIGVLEKTQGVVEGLVKLVKEPIGGTNSSTMKACLSMIFQLVSFSKDRDLISERFVELGLVEALLDTLVECDKGVCEKALGVLDSICGFKIGKEVAKANALTLPLVIKKLLRVSELSSCFAVSILWKICDNRNDDDEEKGVFVEALQVGVFQKLLVLLQVGCGESTKEKATELLKLLNGYRTKAECVDSSSLDFQHLKKPF* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2270 447 SUPERFAMILY RING/U-box 27 106 - -
Aev07g2270 447 ProSiteProfiles U-box domain profile. 30 104 IPR003613 GO:0004842|GO:0016567
Aev07g2270 447 SMART Ubox_2 34 97 IPR003613 GO:0004842|GO:0016567
Aev07g2270 447 Pfam U-box domain 31 102 IPR003613 GO:0004842|GO:0016567
Aev07g2270 447 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 106 IPR013083 -
Aev07g2270 447 SUPERFAMILY ARM repeat 255 426 IPR016024 -
Aev07g2270 447 CDD RING-Ubox_PUB 35 77 IPR045210 -
Aev07g2270 447 PANTHER WDSAM1 PROTEIN 8 447 IPR045185 GO:0061630
Aev07g2270 447 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 8 447 - -
Aev07g2270 447 Gene3D - 122 436 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2270 Aev-Chr7 23631867 23633210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2270 26 447 U-box Gene Family AT5G37490 44.316 4.92e-108 325
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0709 03 5374483 5375802 Aev07g2270 07 23631867 23633210 PCT