Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3399 ATGGGTCCTGGGTTGAAGATGCAGAACCACTACCGCCCTGTGGTTTCTAGGATGAATGAGCAAGCTGTGAGCCAGAAAAGGAAGTACACTTTCATTCAGGCCCATAGGGCTTGGCTTCCAAAGTTTCTTCTTCTATGGATCCTGCTAATGGCCTTCATCGGTTGGTGCATCTACTCTAACATGGATGCTGACACCAAAGTCAGGAGGAAGGAGGTGCTGGGAAGCCTTTGTGATCAAAGGGCAAGAATGCTGCAAGATCAATTCAGTGTTAGTGTCAACCATGTTCATGCCCTTGCCATCCTTGTTTCAACCTTCCATTACTACAGAAACCCTTCTGCCATTGACCAGGAAACCTTTGCAGAATATACAGCTAGGACAGCATTTGAAAGGCCATTGCTGAGTGGGGTGGCTTATGCTCAAAGAGTGGTAAACTCTGAGAGGGAAAGGTTTGAGAAGCAACATGGATGGGTGATAAAGACAATGGAAAGAGAGCCCTCACAGGTTAGAGATGAGTATGCACCGGTCATATTTGCACAGGAAACAGTTTCTTATCTTGAATCTCTTGATATGATGTCTGGGGAGGAGGACCGTGAAAATATTTTGAGGGCCAGGGCCACTGGGAAAGCCGTTCTGACAAGCCCCTTCAGGCTGTTGGGTTCTCATCATCTTGGTGTGGTTTTAACATTCCCTGTTTACAAATCCAAGCTACCTCCAAAGCCAACAGTGGAAGAGCGCATTAAAGCAACAGCAGGATATGTTGGAGGGTCCTTTGATGTTGAGTCCCTTGTAGAGAATTTACTCGGTCAACTTGCTGGTAACCAAGCTATTTTGGTGAATGTGTATGATATCACAAACTCTTGTACCCCCCTGATTATGTATGGCAACCAAAATGAAGAAGGTGATATGTCACTTGTTCATGAAAGTAAGCTTGATTTTGGAGATCCATACAGGAAACATAAGATGATATGTAGGTATCATCAGAAGGCACCTACAAATTGGATAGCACTTACCACAGCATTCCTATTCTTTGTCATTCTCTTATTACTGGGATACATTTTGTATGGCGCCGGGAATCATATTGTCAAAGTCGAAGATGATTTCCATGAGATGCAGGAGTTAAAAGTCCTGGCAGAAGCAGCGGATGTTGCCAAGTCACAGTTTCTAGCTACTGTCTCCCACGAAATTAGAACACCCATGAATGGCATTTTAGGAATGCTTGGTCTGCTTCTAGATACGGAGTTGAGTTCAACTCAACGAGATTATGCTCAGACTGCTCAAGCATGTGGGAAAGCTCTGATAACATTAATAAATGAGGTGCTTGACCGAGCTAAAATTGAAGCTGGCAAGCTAGAGCTGGAAGCAGTTCCATTTGACCTTCGATCCATACTTGATGATGTCCTTTCACTTTTTTCTGAGAAGTCTAGACATAAAGGCTTAGAGTTGGCAGTGTTTGTTTCTGATAAAGTTCCAGATATTGTTATGGGGGATCCTGGGAGATTCAGACAAATTATAACAAATCTTGTTGGCAACTCTGTTAAATTCACTGAACGAGGGCATATATTCGTTAAAGTCCATCTAGCTGAAAATATAAAGCCCACAATGAATGGAAAATCTGAGACTTTTCTAAATGGAGGATCAGATGAAGTTGGGCACATATCTGGTGGTCATCATTCCAAAACCCTCAGTGGATGTGAAGCAGCTGATGAACGGAACAGCTGGGACAATTTCAAGCATCTAATCGCCGATGAAGAAATGTGGTCTCCATTGAATCTTATGAGCAAGTCAAATGGGCAAGTCACCAGTGAAACTTATGAGCAAGTCACCTTGATGGTCTGTGTGGAGGACACTGGAATTGGAATTCCTTTCTCAGCCCAGGATAGGATTTTCATGCCTTTTGTGCAGGCAGATAGCTCAACCTCTCGGAACTACGGTGGTACCGGTATTGGATTGAGTATTAGTAAGTGCCTTGTTGAACTAATGGGTGGTAAGATCAACTTCATAAGCCGACCGCAGGTTGGGAGCACATTTTCATTTACTGCAAACTTTGGAACATTTAAGAAAAGTTCGATAACTGGTGTGAAGAAACTGAATATTGAGGAACTGCCTTCTAGTTTTAGAGGACTTAAAGCCATTGTGGTTGATGGAAAACCTGTTAGAGCTGCTGTGACTAGATACCACTTGAAGAGGCTCGGCATACAGGCTAAGGATGCGAATTGCATTAACAAGGCTGTTTCTTTGTGTGGGAAAAATGGCTCTTTGACCTCAGGATTATTTCAGCCTGATATTGTTTTCATCGAGAAGGATTCATGGTTTTCTGGAGAGAATGGGGTCTTCAGCGTCCGGCAACAAGAATGGAAACAGAATGGGCATACAATTAAGAAGCCTCAGATGATCCTTCTCGCGACCAATATTAGTAATTCTGAATTTGATAAAGCTAAAGCCTCAGGTTTCAGTGACACGGTGATCATGAAGCCTCTGAGAGCCAGTATGGTTGCCGCGTGCCTTCAGCAAGTTCTGGGGATGGGAAAGAAGAAAGGCATGCCTAATGGTTCAACTTTTCTAAAAAGCCTTCTCTGTGGAAAGAGAATCTTAGTGGTCGATGACAATATGGTGAACCGGAGGGTTGCGGCCGGTGCATTGAAAAAGTTTGGAGCTGATGTTACGTGTGCAGAAAGTGGCAAAGTTGCTCTTGAAATGCTTCAGTTGCCTCACAATTTTGATGCTTGCTTCATGGATATTCAAATGCCAGAGATGGACGGGTTTGAAGCAACACGTCGGATTCGGAAGATGGAGAGCAAGGCGAATGAGCAGCAGATGAACGGCGAGAGGAGAAATGAGTTCCATATCCCTATATTGGCCATGACAGCTGATGTAATCCACGCCACATACGATGAGTGCTTGAAATGTGGGATGGATGGATATGTCTCTAAGCCCTTTGAGGAAGAGAATCTGTACCAAGCAGTTGCAAAGTTTTTCAAGACCAAGCCAATCTCAGACTCATGA 3003 0.4379 MGPGLKMQNHYRPVVSRMNEQAVSQKRKYTFIQAHRAWLPKFLLLWILLMAFIGWCIYSNMDADTKVRRKEVLGSLCDQRARMLQDQFSVSVNHVHALAILVSTFHYYRNPSAIDQETFAEYTARTAFERPLLSGVAYAQRVVNSERERFEKQHGWVIKTMEREPSQVRDEYAPVIFAQETVSYLESLDMMSGEEDRENILRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLPPKPTVEERIKATAGYVGGSFDVESLVENLLGQLAGNQAILVNVYDITNSCTPLIMYGNQNEEGDMSLVHESKLDFGDPYRKHKMICRYHQKAPTNWIALTTAFLFFVILLLLGYILYGAGNHIVKVEDDFHEMQELKVLAEAADVAKSQFLATVSHEIRTPMNGILGMLGLLLDTELSSTQRDYAQTAQACGKALITLINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDKVPDIVMGDPGRFRQIITNLVGNSVKFTERGHIFVKVHLAENIKPTMNGKSETFLNGGSDEVGHISGGHHSKTLSGCEAADERNSWDNFKHLIADEEMWSPLNLMSKSNGQVTSETYEQVTLMVCVEDTGIGIPFSAQDRIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGKINFISRPQVGSTFSFTANFGTFKKSSITGVKKLNIEELPSSFRGLKAIVVDGKPVRAAVTRYHLKRLGIQAKDANCINKAVSLCGKNGSLTSGLFQPDIVFIEKDSWFSGENGVFSVRQQEWKQNGHTIKKPQMILLATNISNSEFDKAKASGFSDTVIMKPLRASMVAACLQQVLGMGKKKGMPNGSTFLKSLLCGKRILVVDDNMVNRRVAAGALKKFGADVTCAESGKVALEMLQLPHNFDACFMDIQMPEMDGFEATRRIRKMESKANEQQMNGERRNEFHIPILAMTADVIHATYDECLKCGMDGYVSKPFEEENLYQAVAKFFKTKPISDS* 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3399 1000 Pfam His Kinase A (phospho-acceptor) domain 383 448 IPR003661 GO:0000155|GO:0007165
Aev03g3399 1000 Gene3D - 856 998 - -
Aev03g3399 1000 Gene3D - 703 843 - -
Aev03g3399 1000 ProSiteProfiles Response regulatory domain profile. 862 992 IPR001789 GO:0000160
Aev03g3399 1000 CDD HisKA 383 444 IPR003661 GO:0000155|GO:0007165
Aev03g3399 1000 Gene3D - 61 113 - -
Aev03g3399 1000 ProSiteProfiles Response regulatory domain profile. 709 839 IPR001789 GO:0000160
Aev03g3399 1000 Gene3D CHASE domain 114 329 IPR042240 -
Aev03g3399 1000 SMART HisKA_10 383 448 IPR003661 GO:0000155|GO:0007165
Aev03g3399 1000 SMART HKATPase_4 495 684 IPR003594 -
Aev03g3399 1000 Pfam Response regulator receiver domain 863 988 IPR001789 GO:0000160
Aev03g3399 1000 PANTHER HISTIDINE KINASE 4 24 995 - -
Aev03g3399 1000 SMART CHASE_2 110 295 IPR006189 -
Aev03g3399 1000 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 373 449 IPR036097 GO:0000155|GO:0007165
Aev03g3399 1000 SUPERFAMILY CheY-like 705 840 IPR011006 -
Aev03g3399 1000 ProSiteProfiles CHASE domain profile. 110 322 IPR006189 -
Aev03g3399 1000 Gene3D - 447 687 IPR036890 -
Aev03g3399 1000 SUPERFAMILY CheY-like 860 992 IPR011006 -
Aev03g3399 1000 CDD REC_hyHK_CKI1_RcsC-like 863 988 - -
Aev03g3399 1000 Gene3D - 357 446 - -
Aev03g3399 1000 ProSiteProfiles Histidine kinase domain profile. 390 684 IPR005467 -
Aev03g3399 1000 PANTHER TWO-COMPONENT HISTIDINE KINASE 24 995 - -
Aev03g3399 1000 SMART REC_2 861 988 IPR001789 GO:0000160
Aev03g3399 1000 PRINTS Bacterial sensor protein C-terminal signature 627 637 IPR004358 GO:0016310|GO:0016772
Aev03g3399 1000 PRINTS Bacterial sensor protein C-terminal signature 609 623 IPR004358 GO:0016310|GO:0016772
Aev03g3399 1000 PRINTS Bacterial sensor protein C-terminal signature 644 662 IPR004358 GO:0016310|GO:0016772
Aev03g3399 1000 PRINTS Bacterial sensor protein C-terminal signature 668 681 IPR004358 GO:0016310|GO:0016772
Aev03g3399 1000 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 437 679 IPR036890 -
Aev03g3399 1000 CDD HATPase_EvgS-ArcB-TorS-like 500 682 - -
Aev03g3399 1000 Pfam CHASE domain 113 293 IPR006189 -
Aev03g3399 1000 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 495 681 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3399 Aev-Chr3 31552336 31557434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3399 26 1000 Histidine Kinase Gene Family AT2G01830 71.980 0.0 1409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev03g3399 HATPase_c 7.6e-31 CL0025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3399 03 31552336 31557434 Aev03g3399 03 31552336 31557434 ECH