Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3385 ATGGTGATGGTGAAATCGGGTGAGAGTGGTTGTGGGGTGGCTCCGTTCCTGAACAAGTGCTACGACATGGTGGAGGATGACTCCACTGACTCCGTCATCTCCTGGACCAGTCCCGGCGGCGTCTCCTTCCTCATCTCCGACATCACCCAATTCTCCCTCACCCTCCTCCCCTCCTACTTCAAGCACAACAACTTCTCCAGCTTCATCCGCCAGCTCAATATCTATGGATTCAGGAAAGTTGATACAGATCGCTGGGAATTCGCCAATGACAACTTCATCAGGGGTCAAAAGCATCTGTTGAAGAATATCCGTAGAAGGAAACATCCACACAATGCGGATCAGCAAAAAGTACCGCCACAGCAAGACAATTGTGATGAAGCATCGCAAGAAGCGCCCAATCATATTCATGGCCTCTTGAAGGAAGTTGAGAATCTAAAATCCGGTAAAAATTCCCTCATGCAGGAGTTGGTCAAGCTTAGGCAGCACCAGGAATCTGCTGATAGTAAGCTGCTACTATTGACTGATCGCCTTCAAGGAATGGAAAAGCATCAGCAGCAGATGTTATCATTCTTAGTCATGGTTGTGCAAAGCCCTGGCTTCATGGTTCAGCTGCTTCATCCTAAGGAGAACAATTGGCTTATGGCTGAATCGGGGAACATGTTGGACCGAGGTATACAAGATGGCAAACCAGTTGCTTCTGATGGGATGATAATAAAGTATAAACCTCCAGTAGGTGAAAAATTGAACCCTGTAGTTCCACTATCTCCTGTTTTTGATAGTCAACCAGAACCGGAGCTTTCTGTGGATGGGTTAAAAGACTTTTGCATCAGTTCTGAATTCTTGAAAGTTCTTATGGATGAAAAATTGTCTCCTTTAGAAAACCATTCACCATTTCTTTTACCAGATTTACCGGATGATGGCTCATGGGAAAAACTTTTTCTGGCCGATCCTTTCTTGGGAAAGGTTGATGATTCTAATGAGGAAAAGGAGGGGGCCACTGTCAGTGGAATGGAAATAGAACCTACCACATGTGAAGATCAGAGTGAAAAATCTCAGTCTTTTGAATCTTTGATGATAGAAATGGAGAAAGCTGAGGCTGCATTGGAACTGTGTGGTGATGAGGTTCATTCAGAGGGGACACAGAATTTGGAGTCTCTAACTGAACAAATGGAACTTCTGGCTTCCGAACTAACAACAGAGAGGGAAGGAAGTAACAATGCTTGA 1224 0.4493 MVMVKSGESGCGVAPFLNKCYDMVEDDSTDSVISWTSPGGVSFLISDITQFSLTLLPSYFKHNNFSSFIRQLNIYGFRKVDTDRWEFANDNFIRGQKHLLKNIRRRKHPHNADQQKVPPQQDNCDEASQEAPNHIHGLLKEVENLKSGKNSLMQELVKLRQHQESADSKLLLLTDRLQGMEKHQQQMLSFLVMVVQSPGFMVQLLHPKENNWLMAESGNMLDRGIQDGKPVASDGMIIKYKPPVGEKLNPVVPLSPVFDSQPEPELSVDGLKDFCISSEFLKVLMDEKLSPLENHSPFLLPDLPDDGSWEKLFLADPFLGKVDDSNEEKEGATVSGMEIEPTTCEDQSEKSQSFESLMIEMEKAEAALELCGDEVHSEGTQNLESLTEQMELLASELTTEREGSNNA* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3385 407 MobiDBLite consensus disorder prediction 106 128 - -
Aev03g3385 407 ProSitePatterns HSF-type DNA-binding domain signature. 56 80 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev03g3385 407 PRINTS Heat shock factor (HSF) domain signature 16 39 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev03g3385 407 PRINTS Heat shock factor (HSF) domain signature 55 67 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev03g3385 407 PRINTS Heat shock factor (HSF) domain signature 68 80 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev03g3385 407 Coils Coil 135 162 - -
Aev03g3385 407 Pfam HSF-type DNA-binding 16 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev03g3385 407 Gene3D - 10 107 IPR036388 -
Aev03g3385 407 SMART hsfneu3 12 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev03g3385 407 MobiDBLite consensus disorder prediction 114 128 - -
Aev03g3385 407 SUPERFAMILY "Winged helix" DNA-binding domain 12 106 IPR036390 -
Aev03g3385 407 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-8 3 346 - -
Aev03g3385 407 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 3 346 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3385 Aev-Chr3 31479172 31481079 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3385 13 395 HSF AT1G67970 45.974 1.52e-98 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Aev03g3385 HSF_DNA-bind 5.7e-29 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3385 03 31479172 31481079 Aev03g3385 03 31479172 31481079 ECH