Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3377 ATGGCGATGGCGAAAGAGAAAGAGGAAGACGAAGAAGAGAAAGCGGTTCAGATTCATCAGAACAGTGGGAAGAGGCTGAAATGTATGAGGAACGAAGAAGCAGAGGATGAAACAGAGCTTCCTCTGAAGCCAGGGATTTTCTTTTACCCAACAACCCCAACCTCCTTTGTCGTCTCAGATGCACTTGAACCTGATTTCCCTATCATATATGTCAACAAGGTCTTTGAAATCTTCACTGGCTACCGTGCTGATGAAGCTCTGGGTCGTAACTGCCGGTTCTTGCAGTATAGGGATCCTCGAGCTCAGAGGCGGCACCCTTTGGTGGATCCTGTTGTTGTGTCTGAGATTAGAAGATGCCTTGAGGAAGGTATTGAGTTCCAGGGTGAACTTCTGAATTTCAGGAAGGATGGTACTCCTTTAGTGAACAGACTCAGACTTGCGCCAATTCATGATGATGATGGAATTGTGACACACGTAATAGGTATCCAACTATTTTCTGAAGCAAATCTAGATCTGAACCGTGTCTCGTATCCAGTTTTCAAAGAGACTTGCAATCAAGATTTTGATAAGAATGGCAAATTTTCTCCTAAGAGTGGGCAATCATTGTACAGTCAGCACCAAGAGATGTGTGGCATTCTTCAGCTTTCTGACGAAGTCTTGGCACACAACATTTTGTCACGCTTGACTCCAAGGGATGTTGCATCCATCGGGTCTGTATGCAGGCGGATCCGCCAATTGACAAAGAATGAGCATGTCAGGAAGATGGTGTGTCAAAATGCGTGGGGCAAAGAAGTGACAGGTACATTGGAACTGATGACCAAGAAGTTAGGATGGGGACGTCTGACTCGGGAACTTACTACCCTTGAGGCTGTTTGTTGGAGAAAATTGACAGTTGGAGGAGCAGTGGAGCCTTCACGCTGCAATTTCAGTGCCTGTGCTGCAGGAAATCGTCTTGTATTGTTTGGAGGTGAAGGAGTGGATATGCAACCCATGGATGACACGTTTGTTCTAAACCTCGACGCAAAAAATCCAGAGTGGCGCAGGGTTAGTGTGAAATCATCTCCACCTGGAAGGTGGGGCCACACGCTCTCGTGCTTAAATGGTTCTTGGTTAGTGGTTTTTGGTGGATGTGGCAGGCAAGGATTGCTCAATGACGTGTTTGTGCTTGATTTGGATGCTCAGCAGCCAACATGGAGGGAAGTCTGTGGAGGAACCCCGCCACTTCCAAGATCTTGGCACAGCTCTTGCACGATTGAAGGGTCCAAACTGGTTGTCTCTGGTGGCTGCGCAGATGCCGGGGTACTTCTTAGTGACACATATTTACTAGACCTCACAACAGGCAATCCAATATGGAGAGAAATTCCAACATCTTGGGCTCCCCCTCCTCGGTTGGGGCACTCGCTCTCAGTCTATGGGAGGACCAAAATTCTCATGTTTGGTGGACTTGCCAAGAGTGGACATTTGCGCTTAAGGTCGGGCGAGGCATATACGATTGATCTAGAAGATGAACAGCCACAATGGAGGCAACTAGAATACAGTGCATTCACCGGATCAGCTAGTCAAAGTGCTGTGGTTCCTCCTCCTAGGCTAGACCATGTTGCAGTCAGCATGCCTTGCGGGAGGATCATTATTTTCGGAGGCTCCATTGCAGGTCTTCACTCGCCATCTCAGCTATTTCTCTTGGACCCGGCCGACGAGAAACCATCATGGAGGATCCTCAACGTTCCGGGGCAACCACCGAAATTTGCATGGGGTCATAGCACATGTGTGGTTGGAGGGACAAGGGTTTTGGTGCTGGGTGGACACACTGGGGAGGAATGGATACTGAATGAGTTGCATGAGTTGTGCTTGGCAAGCAGACAGGACAATGACCTGTGA 1878 0.484 MAMAKEKEEDEEEKAVQIHQNSGKRLKCMRNEEAEDETELPLKPGIFFYPTTPTSFVVSDALEPDFPIIYVNKVFEIFTGYRADEALGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFRKDGTPLVNRLRLAPIHDDDGIVTHVIGIQLFSEANLDLNRVSYPVFKETCNQDFDKNGKFSPKSGQSLYSQHQEMCGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGKEVTGTLELMTKKLGWGRLTRELTTLEAVCWRKLTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWRRVSVKSSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAQQPTWREVCGGTPPLPRSWHSSCTIEGSKLVVSGGCADAGVLLSDTYLLDLTTGNPIWREIPTSWAPPPRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDEQPQWRQLEYSAFTGSASQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPADEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELCLASRQDNDL* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3377 625 Pfam Galactose oxidase, central domain 420 471 - -
Aev03g3377 625 Pfam Galactose oxidase, central domain 371 418 - -
Aev03g3377 625 CDD PAS 52 162 IPR000014 -
Aev03g3377 625 Gene3D PAS domain 49 174 - -
Aev03g3377 625 SUPERFAMILY F-box domain 206 279 IPR036047 GO:0005515
Aev03g3377 625 Gene3D - 205 256 - -
Aev03g3377 625 Pfam Kelch motif 530 577 IPR011498 GO:0005515
Aev03g3377 625 PANTHER ADAGIO PROTEIN 3 17 622 - -
Aev03g3377 625 SUPERFAMILY PYP-like sensor domain (PAS domain) 63 163 IPR035965 -
Aev03g3377 625 Gene3D - 284 510 IPR015915 GO:0005515
Aev03g3377 625 Pfam PAS domain 62 162 IPR000014 -
Aev03g3377 625 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 17 622 - -
Aev03g3377 625 Gene3D - 511 622 IPR015915 GO:0005515
Aev03g3377 625 Pfam Galactose oxidase, central domain 306 356 - -
Aev03g3377 625 ProSiteProfiles PAS repeat profile. 68 123 IPR000014 -
Aev03g3377 625 TIGRFAM sensory_box: PAS domain S-box protein 67 162 IPR000014 -
Aev03g3377 625 MobiDBLite consensus disorder prediction 1 22 - -
Aev03g3377 625 Pfam F-box domain 212 249 IPR001810 GO:0005515
Aev03g3377 625 SUPERFAMILY Galactose oxidase, central domain 293 610 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3377 Aev-Chr3 31433199 31436251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3377 51 164 AGC Kinase Gene Family AT5G58140 43.860 2.59e-21 97.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3377 03 31433199 31436251 Aev03g3377 03 31433199 31436251 ECH