Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2408 ATGATGACTCCGAACTTGAATTTGGAACCTGAAAATTATTCAGAAGGCAGCAGCCAAGTTGCTTCCAATGTATCATTGCAAGAAGCATCCCCTGATCTTACCAAGGAAAGCACCACCACCTCTTCCTGTCTTACGAAGGCCGAAGGTGATCAAGGCTCCCTTACTCTTGACTTGACACTTCACTTCAACTCCAGTGATGGTGAATTGAAGGGTACGAGTGATGCTAGCAGCGAAGTGGGAGCTGAAGCTCATGCCTCCGCATCAGCAACACCCCGAGTTTTCTCTTGTAACTACTGCAGGCGGAAGTTCTTTAGCTCGCAGGCGTTGGGGGGTCATCAGAATGCTCACAAAAGGGAGAGGACAATGGCGAAGCGTGCGATGCGAATGGGGATGTTCACAGAGAGGTATACAAGCTTGGCATCTCTGCCTCTTCATGGTTCACCTTTTCGGTCCCTTGGTATTGAAGCTCATGCTGCAATGCACCAAAGACACATGCCACAACTGAGGGCTCCTGATATAAGGGCTGCTGCTAGATTTGAGAAAAACCATTTTGGATCACCAATTTTTGTGGAAGATGACGATGTGAGTTTATTTTGGCCCGGAAGTTTCAGACAGGTAGACCAGCGAGCTGGTGTTAATCTGGTACACGCGCAAACTTCCAATACTAGTTTTGTCCCGATGGCGGCACCGCCTCCACCGCAAACATCTCCGTCCCCGTCTCCAGATCTCACCCTGAAGCTTTAA 744 0.4919 MMTPNLNLEPENYSEGSSQVASNVSLQEASPDLTKESTTTSSCLTKAEGDQGSLTLDLTLHFNSSDGELKGTSDASSEVGAEAHASASATPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMGMFTERYTSLASLPLHGSPFRSLGIEAHAAMHQRHMPQLRAPDIRAAARFEKNHFGSPIFVEDDDVSLFWPGSFRQVDQRAGVNLVHAQTSNTSFVPMAAPPPPQTSPSPSPDLTLKL* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2408 247 MobiDBLite consensus disorder prediction 1 46 - -
Aev03g2408 247 MobiDBLite consensus disorder prediction 225 247 - -
Aev03g2408 247 PANTHER ZINC FINGER PROTEIN 3-RELATED 7 247 - -
Aev03g2408 247 ProSitePatterns Zinc finger C2H2 type domain signature. 96 116 IPR013087 -
Aev03g2408 247 ProSiteProfiles Zinc finger C2H2 type domain profile. 94 121 IPR013087 -
Aev03g2408 247 PANTHER ZINC FINGER PROTEIN JAGGED 7 247 IPR045320 GO:0003700
Aev03g2408 247 Gene3D Classic Zinc Finger 57 140 - -
Aev03g2408 247 SUPERFAMILY beta-beta-alpha zinc fingers 92 122 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2408 Aev-Chr3 25340150 25340893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2408 88 247 C2H2 Transcription Factor Family AT1G66140 47.849 6.86e-43 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev03g2408 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2408 03 25340150 25340893 Aev03g2408 03 25340150 25340893 ECH