Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0709 ATGGTTTTGTCTTGGACCAAAAGAAACGTTTTTCGCCGTGCCCGCAAGGGAACAAAGGAACACCAAGCTCCAAATAGCGATTTAGAACTAGAAATCACGATCCCCACACATTTCCGGTGCCCGGTAAGCTTGGAGTTGATGAATGACCCTGTTACACTGTCCACAGGCATAACCTACGACAGGGAAAGCATCGAGAAATGGATCGAATCAGGGAACAGAACGTGTCCGGTCACCAATCAGGTCCTAACAACCTTCGACATCGTCCCAAACCACGCCATCAGAAGACTCATTCAGGATTGGTGCGTCGATAACAGCTCCTACGGAATCCAGCGGATCCCAACTCCTCGGATTCCTCTCTCTCGCTACGACGTTTCCGAGACCTGTTCGAGGCTGTCCTCTGCTTCCGAAACTGTGGACGCCGCCACGTGTCGTGAATTGGTTGGGCGGATCAGGAATTGGGGGAAAGAGAATGAGAGGAACAAGAGGTGCGTCGTTGGGAACGGTGCCGGTGATGTTCTCGCACGTGCCTTTCATTCATTCTCACGTGACTCGATCGAGAAGCACGTGGTTTTATTGGGCGAGATTTTGGAGGTTCTAACATGGATGCTTCCGATTAGTGAAGAGGGTAAAGTGAATTTGAGCTCAGAAGCTTCTTTGCGAGCCATGGTTTGGTTCTTATGTGGTAATGGTAATGACCTTGGAGCAAGGCAAAATTCAGCTTTATTGCTCAAAGAGGTTCATGTTTCGGCCTTGGAGAAAATTGAAGGACTAATTGAAGCTTTGGTTAAGATGATTAGGGAACCAATTGGGCCAATTTCTACAAAATCATGTTTGGTCACAATTTTCAATTTGGTTTCTTCGGGACAGAACAGAGAGGAAATTTCACACAAGTTTGTGGAATTAGGTTTGGTTTCGATGCTATTAGAGGTTGTTGTTGATTCGGAGAAAGGGATTTGTGAGAAGGCACTAGGGGTTTTGGATTGTGTTTGTGATTTTCAAAAGGGGAAAGAAATTGCTAAGAGGAATGCTTTATTGGTGCCTCTTGCAATTAAGAAGATTTTGAGGGTGTCACAATTGGCTTCTATCTTTGCGGTTTCAATTCTTTGGAAGGTTTGTGATAAGAGTGATGAAGGGGTTTTGATTGAGGCACTTCAAGTTGGGGGATTTCAGAAATTGTTGCTTGTGTTGCAAGTTGGTTGTGATGATGGCACAAAGGAGAAGGTTACTGAATTGTTGAAGCTGTTGAATGGATATAGGAGTAAAGCAGAGTGTGTTGATTCTTCATCATTAGATTTCAAGTACCTTAAGAAGCCATTTTAA 1320 0.4462 MVLSWTKRNVFRRARKGTKEHQAPNSDLELEITIPTHFRCPVSLELMNDPVTLSTGITYDRESIEKWIESGNRTCPVTNQVLTTFDIVPNHAIRRLIQDWCVDNSSYGIQRIPTPRIPLSRYDVSETCSRLSSASETVDAATCRELVGRIRNWGKENERNKRCVVGNGAGDVLARAFHSFSRDSIEKHVVLLGEILEVLTWMLPISEEGKVNLSSEASLRAMVWFLCGNGNDLGARQNSALLLKEVHVSALEKIEGLIEALVKMIREPIGPISTKSCLVTIFNLVSSGQNREEISHKFVELGLVSMLLEVVVDSEKGICEKALGVLDCVCDFQKGKEIAKRNALLVPLAIKKILRVSQLASIFAVSILWKVCDKSDEGVLIEALQVGGFQKLLLVLQVGCDDGTKEKVTELLKLLNGYRSKAECVDSSSLDFKYLKKPF* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0709 439 SUPERFAMILY ARM repeat 139 402 IPR016024 -
Aev03g0709 439 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 5 439 - -
Aev03g0709 439 Pfam U-box domain 34 105 IPR003613 GO:0004842|GO:0016567
Aev03g0709 439 Gene3D - 124 428 IPR011989 -
Aev03g0709 439 ProSiteProfiles U-box domain profile. 33 107 IPR003613 GO:0004842|GO:0016567
Aev03g0709 439 PANTHER WDSAM1 PROTEIN 5 439 IPR045185 GO:0061630
Aev03g0709 439 SUPERFAMILY RING/U-box 29 109 - -
Aev03g0709 439 CDD RING-Ubox_PUB 38 80 IPR045210 -
Aev03g0709 439 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 111 IPR013083 -
Aev03g0709 439 SMART Ubox_2 37 100 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0709 Aev-Chr3 5374483 5375802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0709 24 439 U-box Gene Family AT5G37490 48.000 8.02e-127 372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0709 03 5374483 5375802 Aev03g0709 03 5374483 5375802 ECH
Aev03g0709 03 5374483 5375802 Aev07g2270 07 23631867 23633210 PCT