Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2607 ATGGGGGGTCAGAATCTTTCCACAAAGGAAAGGAGTAGAGATTGGATTGGAGTTCTTATGAACAGCAGCTTTGGTTATTGTGATTATCACCATGACCTTCGATCTAATGAGATGAATGTGTTCTGCGTAGACTGTGCACTTAGGATGTGTAGGCACTGTAAGGAAGCTCATTCCCTACATAGAAGGTTTCAGATTTACAAATATTCCTATCAGGATGTCTTCCGCCATGCCGAGCTGCAGAAGTATTTTGATTGCTCCAAAATCCAGACTTACATTTCCAATAATGAGAGGATTGTGCATCTCAAACCTCGGCCTTCAATCAACAAATCTAAATCTGCTGATCTCAGCCCCGAGTCTAAATCCAAAGAAACCTGCATAGTACTGAGACCAAAGTCAGGTGGCACGTGTGAAGAATGTGGGAAACACCTACAAGATGAGCGTAATCACTTCTGCTCCATTACATGCAAGATCTCAGTGCATCCAGTGGAGACCCAAAACCAAGTTCAAAATCAATGTTCAGAAAACCAAAGTGCTAGAGGAGGAGGAGGCATTGACTTTACAATGAATGATAACCACAATTCAGAACCGGAGTCTTCTATCTCTGAAGCTGAGCCATATGGGTGGGTTGAAGTTGTGAATTTCAGAAAGCGTCCAAGGAAAACTATCCCTAAGAGGCCTCCTGTCTTTGTTTTCACGTCTTAG 702 0.4288 MGGQNLSTKERSRDWIGVLMNSSFGYCDYHHDLRSNEMNVFCVDCALRMCRHCKEAHSLHRRFQIYKYSYQDVFRHAELQKYFDCSKIQTYISNNERIVHLKPRPSINKSKSADLSPESKSKETCIVLRPKSGGTCEECGKHLQDERNHFCSITCKISVHPVETQNQVQNQCSENQSARGGGGIDFTMNDNHNSEPESSISEAEPYGWVEVVNFRKRPRKTIPKRPPVFVFTS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2607 233 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 227 - -
Aed5g2607 233 SUPERFAMILY B-box zinc-binding domain 17 66 - -
Aed5g2607 233 MobiDBLite consensus disorder prediction 168 200 - -
Aed5g2607 233 Pfam PLATZ transcription factor 67 157 IPR006734 -
Aed5g2607 233 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 227 - -
Aed5g2607 233 SMART bboxneu5 22 65 IPR000315 GO:0008270
Aed5g2607 233 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
Aed5g2607 233 MobiDBLite consensus disorder prediction 168 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2607 Aed-Chr5 26769246 26771510 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Aed5g2607 PLATZ 1.9e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2607 5 26769246 26771510 Aed5g2607 5 26769246 26771510 ECH