Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2594 ATGGCGATGGCAAAAGAGAAAGATGAGGTTCAGAACTGTGGGAAGAGATTGAAATGCACGAGGAATCAAGTAGTAGAAGAAGTAGAAGAAGAAGAAGAAGAAGAAGAGAGCGAGCTTCCTCTAAAGCCAGGATTGTTCTTCTACCCAACAACACCCACTTCCTTTGTTGTGTCTGATGCTCTTGAACCCGATTTCCCCATCATATATGTCAACAAGGTCTTTGAAATCTCCACTGGATATCGTGCTGACGAGGCTCTCGGTCGCAACTGCCGGTTCTTACAGTATAGAGATCCTCGAGCTCAGAGGCGACACCCTTTGGTGGACCCTGTTGTTGTGTCTGAGATTAGAAGATGTCTTGAGGAAGGTGTTGAGTTCCAAGGTGAACTTCTAAACTTCAGAAAGGATGGTACTCCTTTGGTGAACAGACTGAGACTTGCACCAATTCATGATGATGATGGGATTGTGACGCACGTAATAGGTATCCAACTCTTTTCTGAGGCAAATATAGATCTGAACCATGTCTCATATCCAGTTTTCAAAGAGACTTGCAAACAAGATTTTGATAAGAATGGTAAATATTCTCCTAAGAGTGGACAATCACTGTACAGTCAGCACCAAGAGATGTGTGGCATTCTTCAGCTTTCTGATGAAGTCTTGGCTCACAACATTTTGTCACGCTTGACGCCAAGGGATGTTGCATCCATTGGGTCTGTATGCAGGAGGATCCGTCAATTAACAAAGAACGAGCATGTGAGGAAGATGGTATGTCAAAATGCGTGGGGCAAAGAAGTGACAGGCACATTGGAACTGATGACCAAGAAGTTGGGATGGGGTCGTCTGACCCGGGAACTTACCACTCTCGAGGCTGTTTGTTGGAGAAAACTGACAGTTAGAGGTGCAGTGGAGCCTTCGCGCTGCAATTTCAGTGCTTGTGCTGCAGGAAACAGACTTGTATTGTTTGGAGGTGAAGGAGTGGATATGCAACCTATGGATGACACTTTTGTTCTAAATCTTGATGCTAAAAATCCAGAATGGCGCAGGATTAGTGTGAAATCATCCCCACCCGGAAGGTGGGGCCACACACTCTCATGCTTAAATGGTTCTTGGTTAGTGGTTTTTGGTGGGTGTGGTAGGCAAGGATTGCTCAATGATGTGTTTGTGCTTGATTTGGATGCTCAACAGCCAACATGGAGGGAGGTTTGTGGTGGAACCCCACCACTTCCTAGATCATGGCACAGCTCCTGCACAATTGAAGGATCCAAATTGGTTGTCTCCGGCGGGTGCACAGATGCCGGGGTACTTCTTAGTGACACATATTTACTGGACCTCACAATAGATAATCCAACATGGAGAGAAATTCCAACTTCATGGGCTCCTCCTTCTAGGTTGGGGCACTCACTCTCAGTTTATGGGAGGACAAAGCTTCTCATGTTTGGTGGACTTGCCAAGAGTGGACACTTGCGGCTACGATCAGGTGAGGCTTATACGATCGACTTAGAAGATGAACAACCACAATGGAGGCAACTAGAATGTAGTGCATTCACGGGGTTAGCGAGTCAAAGTGCTGTTGTTCCTCCTCCTAGGCTGGATCATGTTGCTGTCAGCATGCCTTGTGGGAGGATCATTATATTTGGAGGTTCCATTGCTGGTCTTCACTCACCATCTCAGCTCTTTTTGTTGGACCCTTCTGAAGAGAAACCATCCTGGAGGATCCTCAATGTTCCAGGGCAACCACCTAAATTTGCTTGGGGTCATAGCACTTGTGTGGTTGGAGGGACTAGGGTGTTGGTGCTGGGTGGACACACTGGGGAGGAATGGATACTGAATGAGTTGCATGAATTATGCTTGGCAAGTCGACAGGACTCTGACCTCTGA 1875 0.4667 MAMAKEKDEVQNCGKRLKCTRNQVVEEVEEEEEEEESELPLKPGLFFYPTTPTSFVVSDALEPDFPIIYVNKVFEISTGYRADEALGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGVEFQGELLNFRKDGTPLVNRLRLAPIHDDDGIVTHVIGIQLFSEANIDLNHVSYPVFKETCKQDFDKNGKYSPKSGQSLYSQHQEMCGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGKEVTGTLELMTKKLGWGRLTRELTTLEAVCWRKLTVRGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWRRISVKSSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAQQPTWREVCGGTPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTIDNPTWREIPTSWAPPSRLGHSLSVYGRTKLLMFGGLAKSGHLRLRSGEAYTIDLEDEQPQWRQLECSAFTGLASQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELCLASRQDSDL 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2594 624 Gene3D - 281 488 IPR015915 GO:0005515
Aed5g2594 624 SUPERFAMILY F-box domain 205 280 IPR036047 GO:0005515
Aed5g2594 624 TIGRFAM sensory_box: PAS domain S-box protein 66 161 IPR000014 -
Aed5g2594 624 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 4 621 - -
Aed5g2594 624 Pfam Galactose oxidase, central domain 419 470 - -
Aed5g2594 624 Pfam Galactose oxidase, central domain 370 417 - -
Aed5g2594 624 Gene3D PAS domain 48 173 - -
Aed5g2594 624 Gene3D - 204 255 - -
Aed5g2594 624 CDD PAS 51 161 IPR000014 -
Aed5g2594 624 SUPERFAMILY Galactose oxidase, central domain 291 609 IPR011043 -
Aed5g2594 624 PANTHER ADAGIO PROTEIN 3 4 621 - -
Aed5g2594 624 Pfam PAS domain 61 161 IPR000014 -
Aed5g2594 624 Pfam F-box domain 211 248 IPR001810 GO:0005515
Aed5g2594 624 Gene3D - 489 619 IPR015915 GO:0005515
Aed5g2594 624 Pfam Galactose oxidase, central domain 305 355 - -
Aed5g2594 624 Coils Coil 14 34 - -
Aed5g2594 624 SUPERFAMILY PYP-like sensor domain (PAS domain) 62 162 IPR035965 -
Aed5g2594 624 Pfam Kelch motif 529 576 IPR011498 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2594 Aed-Chr5 26681105 26684717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2594 50 163 AGC Kinase Gene Family AT5G58140 43.860 4.09e-21 96.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2594 5 26681105 26684717 Aed5g2594 5 26681105 26684717 ECH