Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2588 ATGTCGTGGGAAGACGAGATTGTGATGCGCGATGTCACGAATGCGGGGCTTGTTGTCAGCGATCGCATTGGTCGCGAAGTTTCGTCTCAGCTCGACCTCGAAGAAGCTCTAGAAGCTTCCAGATACGCTAGCCACCCTTATTCCACTCACCCCCGAGAGTGGCCCCCTTTAGTTGAGGTGGCGAATACCTGGGAGTTGCCTCCGGTGCTCATTGAAAGATACAATGCAGCTGGTGGGGAAGGAACTGCTTTTTGTGGAATATTTCCTGAAATACGAAGGGCATGGGCATCTGTGGACAATTCATTGTTTCTTTGGCGTTTTGATAAGTGGGATGGCCAATGTCCGGAATTTAGTGGGGAAGAGCAAGCTATCTGTGCAGTTGGTCTTGCAAAATCAAAACCTGGAGTTTTTGTTGAAGCTATCCAATATCTCTTAGTTTTAGCAACGCCTGTTGAGTTAATTTTAGTAGGAGTATGCTGCTCTGGAGGAGCAGATGGTTCAGATCCATTTGCAGAAGTTACATTGCAGCCATTGCCAGAGCATACAATACCATCTGATGGTGTTACAATGACTTGTGTGGCATGTACTGATAAGGGCCGCATTTTCCTTGCTGGTCGGGATGGCCACATATACGAGATTCTTTATTCAACTGGTTCTGGATGGCAAAAGCGGTGCAGAAAAATTTGCATCACTGCTGGTTTAGGAAGTGTAATTTCAAGATGGGTTATACCAAATGTTTTCAATTTTGGAGCTGTTGACCCCATTGTTGAAATGGTTTTTGACAATGAGAGACAAATATTGTATGCACGAACTGAAGAGATGAAGCTTCAAGTTTATGTTCTTGGACCAAATGGTGATGGCCCATTAAAGAAAGTAGCTGAAGAAAAGAATCTTGTCAATCAGAGGGATGCACATTATGGAGCAAGACAATCAACAGGGTCAAGAGTCTCAAGTCGATCTCCAAAGCCATCTATTGTTTGCATCTCACCTTTATCTACACTTGAATCCAAGTGGCTACATCTTGTTGCTGTTTTATCAGATGGCCGAAGGATGTACCTATCTACCTCTGCTTCTAGTGGAAGCTTGACTGGGTTCAACATCAATCATCATAAGCCTAGCTGTTTAAAGGTTGTCACTACAAGGCCTGCTCCTCCTTGGGGTGTTAGTGGTGGTCTCACCTTTGGAGCCATGGCTCTTACTGGTAGACCTCAGAATGAGGATCTCTCCCTGAAAGTTGAGGCAGCTTATTATTCTGCTGGAACTCTTGTCCTATCTGATGCATCACCTTCAGCCATGCCTTCACTCCTTGTTTTGAACAGGGATTCAAGCACACAGTCATCACCGTCAGGTAATCTAGGAACAAGTGCAAGGAGTTCCCGGGCATTAAGGGAGTCTGTATCTTCTTTACCGGTTGAAGGACGAATGCTTTCTGTGGCAGATGTTTTACCTTTGCCAGATACCGCAGCTACTGTACAGTCTCTATATTCAGAAATTGAGTTTGGTGGTTATGAGAGCTCCATGGAATCATGTGAAAGGGTGTCTGGCAAACTCTGGGCAAGAGGAGATCTCTCAACCCAACATATACTGCCAAGAAGAAGGATCATCGTCTTCAGCACCATGGGTATGATGGAAATTGTTTTTAACAGGCCACTGGACATTCTAAGGCGGCTATTGGAATCCAACTCTCCACGATCAGTTTTAGAAGATTTCTTCAATCGTTTTGGTGCAGGTGAGGCAGCTGCAATGTCTCTAATGCTAGCTGCAAGAATAGTGCATTCTGAAAACCTTATCAGCAATGTTATAGCTGAGAAGGCAGCTGAAGCTTTTGAGGACCCAAGAGTTGTTGGCATGCCACAACTTGAAGGTAGTAATGCATTATCAAACACAAGAAGTGCTACTGGTGGATTTAGCATGGGTCAGGTTGTTCAGGAGGCTGAGCCTGTTTTTTCAGGTGCACATGAAGGGCTCTGTTTGTGTTCGTCTAGATTACTTTTTCCTCTGTGGGAACTTCCTGTAATGGTTGTAAAGGGAAGTTTAGGTCCATCAGGCACTCTTTCTGAAAATGGAGTAGTTGTGTGCAGACTCTCTGTTGGGGCTATGCAAATCCTTGAACAGAAACTCCGATCATTGGAGAAGTTCTTAAGATCTAGAAGGAACCAGAGGAGGGGACTTTATGGCTGTGTAGCAGGTTTAGGAGATGTGAGTGGTTCTATTCTGTATGGTAATGTTTCGGCATTAGGAGCTGGGGATCGAAATATGGTAAGAAACTTATTTGGTGCGTATTCCAGAAATATGGAGTCCAATGGTGGCAGAACAACTAATAAACGGCAAAGATTGCCATATAGTCCTGCTGAGTTAGCTGCCATGGAGGTGAGGGCAATGGAGTGTATTAGGCAGTTGCTCCTTAGATCTGGTGAAGCCCTATTTTTGCTTCAACTTCTTTCACAGCATCATGTGACTCGATTGATTCAGGGATTTGATTCTAACCTTCAACAAGCATTAATTCAGTTGACATTTCATCAACTAGTTTGTTCTGAGGAGGGTGACCATCTTGCTACAAGACTTATATCTGCTCTCATGGAGTATTATACTGGTCCTGATGGCAGGGGGACTGTAGATGACATTAGTAGGAGATTGAGAGATGGTTGTCCAAGCTACTATAAGGAGTCTGATTACAAATTCTTCTTAGCTGTGGAAGCCCTGGAGAGAGCTGCTATGACTATGGACGCCGAGGATAAGGAGAATCTTGCAAGGGAAGCATTTAATTCCTTAAGTAGAGTTCCAGAGTCTGTGGACTTGAGAACTGTTTGCAAACGTTTTGAGGATTTAAGATTTTATGAAGCTGTAGTGCGCTTACCTCTACAAAAGGCACAGGCTCTTGACCCCGCAGGCGATGCTTATAACAATGAAATTGATGCAACTGTCAGAGAACAAGCACTTGCTCAACGGGAGCAGTGTTATGAAATAATTATCAGTGCTTTGCGGTCTCTGAAAGGTGACACCATGCAGAGGGAATTTGGCACTCCTATTAGATCAACTGCTTCACAATCTGCTCTTGATCCAGCCTCTCGGAAGAAATATATATGCCAAATTGTTCAGCTGGGTGTCCAATCACCTGACAGAATTTTCCATGAGTATCTTTACCAGGCTATGATTGATTTAGGCCTCGAGAATGAATTGCTAGAGTATGGGGGTCCTGATCTGTTGCCATTTTTGCAAAGTGCCGGTCATAGACCTATACACGAGGTTCGTGCTGTGGCTGCCACAACTTCTCCAGTGGGGCAATCAGGAGCACCTATGTCATCTAATCAAGTCAAGTACTATGAACTTTTGGCACAGTATTATGTATTGAAACGCCAACATATGCTTGCAGCTCATGCATTGCTTAGACTAGCTGAAAGGCGTTCTATTGATGGAGTTCCTACCCTTGAACAGAGACTATTGATGGGAACCAAGGTTAAGGAGAGGTTAAATTCAGGGGTTGAAGCAGTTGGAGATGAAGATGTTGCAAGAGCCCTTGTATCTGCTTGTAAGGGTGCAGTTGAACCTGTATTGAACGCATATGACCAATTGTTATCAAATGGGGCTATTTTGCCATCCCCAAGTGTTAGATTACGTATGCTAAGATCGGTTCTAGTGGTACTTCGAGAGTGGGCATTGTCTGTATATTCACAAAGAATGGGTAGCAGTGCCGCCGGGCATTCCCTAATACTAAGTGGAGGATTCTCATCGGAACGTACTATTGCCAGCCAAGGAATTCGGGACAAGATCACAAGTGCAGCAAACAGGTCTTTGTTCCTTCCTTGA 3807 0.4437 MSWEDEIVMRDVTNAGLVVSDRIGREVSSQLDLEEALEASRYASHPYSTHPREWPPLVEVANTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEFSGEEQAICAVGLAKSKPGVFVEAIQYLLVLATPVELILVGVCCSGGADGSDPFAEVTLQPLPEHTIPSDGVTMTCVACTDKGRIFLAGRDGHIYEILYSTGSGWQKRCRKICITAGLGSVISRWVIPNVFNFGAVDPIVEMVFDNERQILYARTEEMKLQVYVLGPNGDGPLKKVAEEKNLVNQRDAHYGARQSTGSRVSSRSPKPSIVCISPLSTLESKWLHLVAVLSDGRRMYLSTSASSGSLTGFNINHHKPSCLKVVTTRPAPPWGVSGGLTFGAMALTGRPQNEDLSLKVEAAYYSAGTLVLSDASPSAMPSLLVLNRDSSTQSSPSGNLGTSARSSRALRESVSSLPVEGRMLSVADVLPLPDTAATVQSLYSEIEFGGYESSMESCERVSGKLWARGDLSTQHILPRRRIIVFSTMGMMEIVFNRPLDILRRLLESNSPRSVLEDFFNRFGAGEAAAMSLMLAARIVHSENLISNVIAEKAAEAFEDPRVVGMPQLEGSNALSNTRSATGGFSMGQVVQEAEPVFSGAHEGLCLCSSRLLFPLWELPVMVVKGSLGPSGTLSENGVVVCRLSVGAMQILEQKLRSLEKFLRSRRNQRRGLYGCVAGLGDVSGSILYGNVSALGAGDRNMVRNLFGAYSRNMESNGGRTTNKRQRLPYSPAELAAMEVRAMECIRQLLLRSGEALFLLQLLSQHHVTRLIQGFDSNLQQALIQLTFHQLVCSEEGDHLATRLISALMEYYTGPDGRGTVDDISRRLRDGCPSYYKESDYKFFLAVEALERAAMTMDAEDKENLAREAFNSLSRVPESVDLRTVCKRFEDLRFYEAVVRLPLQKAQALDPAGDAYNNEIDATVREQALAQREQCYEIIISALRSLKGDTMQREFGTPIRSTASQSALDPASRKKYICQIVQLGVQSPDRIFHEYLYQAMIDLGLENELLEYGGPDLLPFLQSAGHRPIHEVRAVAATTSPVGQSGAPMSSNQVKYYELLAQYYVLKRQHMLAAHALLRLAERRSIDGVPTLEQRLLMGTKVKERLNSGVEAVGDEDVARALVSACKGAVEPVLNAYDQLLSNGAILPSPSVRLRMLRSVLVVLREWALSVYSQRMGSSAAGHSLILSGGFSSERTIASQGIRDKITSAANRSLFLP 1268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2588 1268 Gene3D - 894 1054 IPR042533 -
Aed5g2588 1268 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP155 1161 1265 IPR004870 GO:0005643|GO:0006913|GO:0017056
Aed5g2588 1268 Pfam Nup133 N terminal like 54 543 IPR014908 -
Aed5g2588 1268 Gene3D - 531 883 - -
Aed5g2588 1268 MobiDBLite consensus disorder prediction 440 463 - -
Aed5g2588 1268 Gene3D Nucleoporin, helical domain, central subdomain 1057 1149 IPR042537 -
Aed5g2588 1268 Coils Coil 700 720 - -
Aed5g2588 1268 PANTHER BNAC05G49530D PROTEIN 1161 1265 - -
Aed5g2588 1268 PANTHER BNAC05G49530D PROTEIN 2 1146 - -
Aed5g2588 1268 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP155 2 1146 IPR004870 GO:0005643|GO:0006913|GO:0017056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2588 5 26644246 26653277 Aed5g2588 5 26644246 26653277 ECH