Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2587 ATGGCCGACGCTCTCTCGTTGATTCCGGCAGCCGTGCTTCGCAACCTTGCTGACAAGCTCTATGAGAAGCGCAAAAATGCTGCTCTTGATATTGAGGGGATAGTGAAGCAGCTAACTTCTGCTGGGGATCATGATAAAATAACGGCTGTGATCAATTTGTTGACTACGGAATATACTTATTCACCACAAGCTAATCATCGGAAGGGAGGATTGATAGGATTAGCAGCTGCAACTGTTGGGTTGACTTCTGAAGCAGCTCAGCATCTCGAGCAAATTGTGCCCCCTGTATTAAATTCTTTCTCTGATCAAGATAGCAGAGTTCGTTATTATGCTTGCGAAGCACTTTATAACATAGCCAAGGTTGTGAGAGGAGATTTTATTATTTTCTTCAACCAGATCTTTGATGCCTTATGCAAGCTTTCTGCAGACTCAGATGCCAATGTTCAAAGTGCTGCTCACCTCTTAGATAGGCTTGTGAAGGATATTGTGACTGAAAGTGATCAGTTCAGTATTGAAGAATTCATACCACTGCTGAGGGAGCGCATGAATGTGTTGAATCCATATGTCCGCCAGTTTTTGGTAGGATGGATTACTGTATTGGACAGTGTCCCAGATATTGATATGCTGGGTTTTCTTCCTGATTTTCTTGATGGCTTGTTTAATATGTTGAGTGATTCAAGTCATGAAATACGTCAACAAGCTGATTCAGCTCTTTCAGAGTTTCTTCAAGAGATTAAAAACTCCCCATCTGTAGATTATGGTCGCATGGCTGAAATCCTGGTACAGAGAGCAGGTTCTCCAGATGAATTTACTAGGCTAACAGCTATCACATGGATAAATGAGTTTGTCAAGCTTGGTGGAGACCAGCTTGTTCCATATTATGGTGACATTCTTGGAGCCATTTTGCCTTGTATAGCAGATAAAGAAGAGAAAATTAGAGTTGTTGCTCGTGAAACCAATGAAGAGCTACGTGCCCTCAAGGTGGATCCAGCTGAAGCGTTTGATGTAGGAGCAATCCTCTCCATTGCCAGGAGGCAATTATCTAGTGAATTGGAGGCTACTCGAATTGAAGCTTTGCACTGGATATCAACCCTTTTAAACAAATATCTTCTTGATGTTCATGCATGCATTGCAAAAGATCCTCAGCACTTTCGGCAACTTGTTGTCTTCCTGGTGCACAATTTCCGGGTAGACAATTCCCTTTTGGAGAAGCGTGGTGCTTTGATAATTCGTCGGCTTTGTGTGCTTTTGAATGCTGAGAGAGTCTACCGTGAACTTTCTACAATACTAGAAGGGGAATCTGACTTGGATTTTGCATCAATTATGGTTCAGGCTTTGAATTTGATCTTACTTACATCATCGGAACTATCTGAGATTCGAGATCTTTTGAAGCAATCACTGGTAAATCCTGCTGGGAAGGATTTATATGTTTCTTTGTATGCCTCGTGGTGCCATTCTCCAATGGCAATTATAAGTCTGTGCTTATTGGCTCAGACTTACCAACATGCAAGTGCTGTGATTCAATCTCTGGTTGAGGAGGATATTAATGTTAAATTCTTAGTCCAGCTGGATAAGCTGATTCGCTTGCTGGAAACTCCAATCTTTGCTTATTTAAGATTGCAGCTTCTCGAACCTGGAAGATATACATGGTTATTCAAAGCATTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCTGCCTTCAAGATTCTCAAAACTCGTTTAAAAGCTGTGCCATCGTATTCCTTCAATGGTGAGCAATTGAAGAAGACATCTTCAGGAAATCCCTATCAATTTCTCCATCACATGTCCGGGGGATCTCAAATCAGTGAGGATGGTGACATAGCTATGGATAGTGGGAACTCACACAATGGGATAAATTTTGCTGCAAGGCTACAACAGTTTCAGCAAATGCAGCACCAACATCGTGAGGCACAGAGACAAGAAGAACCAAAGCAACCTCAGTTGAGTGAGGTTAATGTTGTTGCTCAAACAAGATCATCTAAAAGAGCCCAGGGTGCGCACTAG 2031 0.421 MADALSLIPAAVLRNLADKLYEKRKNAALDIEGIVKQLTSAGDHDKITAVINLLTTEYTYSPQANHRKGGLIGLAAATVGLTSEAAQHLEQIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIIFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYGDILGAILPCIADKEEKIRVVARETNEELRALKVDPAEAFDVGAILSIARRQLSSELEATRIEALHWISTLLNKYLLDVHACIAKDPQHFRQLVVFLVHNFRVDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMVQALNLILLTSSELSEIRDLLKQSLVNPAGKDLYVSLYASWCHSPMAIISLCLLAQTYQHASAVIQSLVEEDINVKFLVQLDKLIRLLETPIFAYLRLQLLEPGRYTWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNGEQLKKTSSGNPYQFLHHMSGGSQISEDGDIAMDSGNSHNGINFAARLQQFQQMQHQHREAQRQEEPKQPQLSEVNVVAQTRSSKRAQGAH 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2587 676 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Aed5g2587 676 SUPERFAMILY ARM repeat 3 514 IPR016024 -
Aed5g2587 676 Gene3D - 246 428 IPR011989 -
Aed5g2587 676 PANTHER TAX1 BINDING PROTEIN-RELATED 4 369 IPR026825 GO:0006661|GO:0070772
Aed5g2587 676 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Aed5g2587 676 PANTHER PROTEIN VAC14 HOMOLOG 4 369 - -
Aed5g2587 676 MobiDBLite consensus disorder prediction 653 676 - -
Aed5g2587 676 Gene3D - 1 245 IPR011989 -
Aed5g2587 676 MobiDBLite consensus disorder prediction 638 676 - -
Aed5g2587 676 Pfam Vacuolar protein 14 C-terminal Fig4p binding 400 579 IPR021841 -
Aed5g2587 676 PANTHER TAX1 BINDING PROTEIN-RELATED 370 650 IPR026825 GO:0006661|GO:0070772
Aed5g2587 676 PANTHER PROTEIN VAC14 HOMOLOG 370 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2587 Aed-Chr5 26632869 26641439 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2587 5 26632869 26641439 Aed5g2587 5 26632869 26641439 ECH