Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2586 ATGATGGAGGGGAAGGGTGTGCGGTTCTTAGCGTACCAATCAATATTTGATAGCGTTGGATCTGGGGACTTTGATGGGGTCAAGAGAGTTGTGGAGAAAGTGAAGAAGGAAGAAATAGAAGGGACATCATCGCTCTCTGATGTCATGTCCCTTCAGAACGATGCTGGAGAGACTGCGTTATACATCGCTGCACAGAATAATCTGCAAGAAATTTTCAGCTTCTTGCTCAGCTTCTGTGACTTTGAGGTCCTCAAGATTCGCTCCAAGGCTGATATGAACGCCTTTCATGTTGCTGCCAAGTCTGGCAATCTAGATATTGTGAGGGAGATTTTGAATACTTGGCCTGAGGTGTGCAAGTTATGCAACTCCTCAAACACCAGTCCTCTATATTCTGCTGCAGTTCAAGACCAGTTGGATGTGGTGAATGCTATCTTGGATGTCGATGTCAGTTCCATGTTCATAGTTAGGAAAAACGGCAAAACTTCACTGCACAATGCTGTTAGGTATGGTGTCCTTCGTATTGTAAAAACACTTATTGCTCGGGATCCAGGAATCGTATGCATCAAAGATAAAAAAGGTCAAACTGCACTGCATATGGCTGTCAAAGGACAGTGTACTTCAGTGGTGGAGGAGATACTACTAGCTGATCCTTCTATATTGAATGAGCGAGATAAGAAGGGTAATACAGCTCTTCACATGGCTACTAGGAAATGCCGTTCACAGATAGTGAGCCTTTTGCTAAGCTATTCTGCTGTGGATGTTAATGCCATCAACAAGCAGCAGGAAACAGCCTTGGATTTGGCAGATAAACTGCCATATGGAGATTCAGCTTTGGAAATAAAGGAAGCCCTTGCAGAATATGGTGCTAAGAATGCCAGGTATGTTGGCAAAGAAGATGAAGCAATGGAACTTAAAAGAACTGTGAGTGATATAAAGCATGAGGTGCAGTCACAACTTATACAAAATGAAACAACACGCCGACGGGTTTCTGGTATTGCCAAGGAGTTGAAGAAACTTCATAGAGAAGCAGTTCAAAACACCATTAATTATGTCACAGTGGTTGCTGTCCTTTTTGCCTCAATAGCATTCTTGGCCATCTTCAATTTGCCGGGTCAATATATAATGGATGGTGGAAAAGAGACTGGGAAAGCTAATATAGCAGATCATGTTAGTTTCCAAGTTTTCTGCCTTCTGAATTCTACATCTCTTTTCATTTCTCTTGCAGTTGTTGTAGTTCAAATTACTTTGGTAGCCTGGGACACAAGGGCTCAAAAGCAGATTGTGTCAGTGGTTAACAAGTTGATGTGGGCTGCATGTGCTTGCACTTGTGGTGCTTTTCTAGCAATAGCTTTTGAGGTTGTTGGAAAGAAAACATGGATGGCTATCACCATCACCCTTTTGGGGGTACCTATTCTAGTTGGCACTCTAGCAAGCATGTGCTACTTTGTTTTTCGACAACATTTCGGGAGTGATTCCCAGAGACGCATCAAGAGAGCAAGTGGAAGCAAATCTTTCTCATGGTCCTACTCTGCAAATATATCAGATTTGGATGAATACAATTCTGACATTGAGAAGATCTATGCCTTGTGA 1590 0.4252 MMEGKGVRFLAYQSIFDSVGSGDFDGVKRVVEKVKKEEIEGTSSLSDVMSLQNDAGETALYIAAQNNLQEIFSFLLSFCDFEVLKIRSKADMNAFHVAAKSGNLDIVREILNTWPEVCKLCNSSNTSPLYSAAVQDQLDVVNAILDVDVSSMFIVRKNGKTSLHNAVRYGVLRIVKTLIARDPGIVCIKDKKGQTALHMAVKGQCTSVVEEILLADPSILNERDKKGNTALHMATRKCRSQIVSLLLSYSAVDVNAINKQQETALDLADKLPYGDSALEIKEALAEYGAKNARYVGKEDEAMELKRTVSDIKHEVQSQLIQNETTRRRVSGIAKELKKLHREAVQNTINYVTVVAVLFASIAFLAIFNLPGQYIMDGGKETGKANIADHVSFQVFCLLNSTSLFISLAVVVVQITLVAWDTRAQKQIVSVVNKLMWAACACTCGAFLAIAFEVVGKKTWMAITITLLGVPILVGTLASMCYFVFRQHFGSDSQRRIKRASGSKSFSWSYSANISDLDEYNSDIEKIYAL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2586 529 Pfam Ankyrin repeats (3 copies) 190 256 IPR002110 GO:0005515
Aed5g2586 529 Pfam Ankyrin repeats (3 copies) 90 146 IPR002110 GO:0005515
Aed5g2586 529 PANTHER ANKYRIN REPEAT PLANT-LIKE PROTEIN 4 529 - -
Aed5g2586 529 SUPERFAMILY Ankyrin repeat 17 288 IPR036770 -
Aed5g2586 529 Pfam Domain of unknown function 342 450 IPR026961 -
Aed5g2586 529 Gene3D - 20 149 IPR036770 -
Aed5g2586 529 Gene3D - 150 306 IPR036770 -
Aed5g2586 529 ProSiteProfiles Ankyrin repeat profile. 226 251 IPR002110 GO:0005515
Aed5g2586 529 SMART ANK_2a 90 119 IPR002110 GO:0005515
Aed5g2586 529 SMART ANK_2a 55 83 IPR002110 GO:0005515
Aed5g2586 529 SMART ANK_2a 226 256 IPR002110 GO:0005515
Aed5g2586 529 SMART ANK_2a 158 187 IPR002110 GO:0005515
Aed5g2586 529 SMART ANK_2a 124 154 IPR002110 GO:0005515
Aed5g2586 529 SMART ANK_2a 192 221 IPR002110 GO:0005515
Aed5g2586 529 ProSiteProfiles Ankyrin repeat region circular profile. 226 251 - -
Aed5g2586 529 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 4 529 - -
Aed5g2586 529 ProSiteProfiles Ankyrin repeat profile. 158 179 IPR002110 GO:0005515
Aed5g2586 529 ProSiteProfiles Ankyrin repeat region circular profile. 158 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2586 Aed-Chr5 26629238 26632468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2586 2 529 Miscellaneous Gene Families AT2G01680 68.224 0.0 728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2586 5 26629238 26632468 Aed5g2586 5 26629238 26632468 ECH