Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2576 ATGGGTTCCGAAGGTTCCACTGTTGTCGTTCCTAGGAGTTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAATTGGAGATGGAACTGTTAGCTACGGAATGGATGATGCTGATGATATCTACATGCAGTCCTGGACTGGGACTATTATTGGCCCCCCTGGTACTGTTCATGAAGGGTGTATCTACCAGCTGAAATTATTTTGTGGCAAGGATTATCCAGAGAATCCACCATCTGTAAGATTCCAGACCAGGATTAACATGACTTGTGTCAACCAAGAAACTGGAGTGGTTGAGCCACATTTGTTTCCTATGCTTGCTAATTGGCAAAGAGAGTGTACAATGGAAGACATTTTGATGCAATTGAAGAAAGAAATGATGTCTCCACAAAATCGGAAGCTAGCTCAGCCACCTGAAGGCAATGAAGATGGCAGGATTGACCAAAAGGGGCTGGTGCTGAGATGTTGTATCATGTAA 480 0.4396 MGSEGSTVVVPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPGTVHEGCIYQLKLFCGKDYPENPPSVRFQTRINMTCVNQETGVVEPHLFPMLANWQRECTMEDILMQLKKEMMSPQNRKLAQPPEGNEDGRIDQKGLVLRCCIM 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2576 159 Gene3D Ubiquitin Conjugating Enzyme 2 144 IPR016135 -
Aed5g2576 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1A-LIKE 8 144 - -
Aed5g2576 159 SUPERFAMILY UBC-like 8 142 IPR016135 -
Aed5g2576 159 Pfam Ubiquitin-conjugating enzyme 41 135 IPR000608 -
Aed5g2576 159 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 159 IPR000608 -
Aed5g2576 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 8 144 - -
Aed5g2576 159 SMART ubc_7 14 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2576 Aed-Chr5 26588582 26591503 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2576 5 26588582 26591503 Aed5g2576 5 26588582 26591503 ECH