Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2575 ATGCTTCTTCTTTTCCTCTTCCTTCTGGCCCCGTCAACCTCCGCCATCGACACCTTCATCTTCGGCGGTTGCTCCCAGCCCAAGTTCACTCCCGGTTCTCCCTACGAAAACACCGTCAACTCCCTCCTCACCTCCCTCGTCAACTCGGCCGCCTTCTCCAACTACAACAACTTCACCCTCCAGACCGCCTCCGACGACGACACTGTCTACTCCCTCTTCCAGTGCCGCGGCGACCTCTCCAACGACCAGTGCTCCCGCTGCGTCGCGCGTGCTGTCACTCAGCTCGGCACCCTCTGCTTCTCCTCCTGCGGCGGCGCGTTGCAGCTCGACGGCTGTTTTGTCAAGTACGACAATGCCACCTTCATCGGAGTCGAGGACAAGACCTTGGTCACCAAGAAATGTGGGCCATCCGTTGGGTTGAATTCGGATGCGTTGACCCGCAGGGACGCTGCGCTGGCGTATCTGCAGACGTCGGATGGGGCTTACAAGACGTTCAGGACCAGTAGCGGGTTTGGGGATTTTCAGGGTGTGGCGCAGTGCACTGGGGATTTGAGTCCCAGCGAGTGCCAGGATTGTCTTTCTGATTCCATCCAACGCTTGAAAACTGACTGCGGGCCCACTACCTGGGCAGAGATTTACTTGGCTAAGTGCTACGCCCGCTACTCCGAAGGTTCCACTCGCTCGCGTGCTAATAATAATGATGATAGCAATCACAATGATAATGAGATCGAGAAGACACTCGCTATACTAATTGGACTCATTGCCGGAGTTGCTCTAATCATTGTTTTCCTTTCCTTCTTGTCCAAGGTTTGCGAAAAGCACAAAGGTATGTATGGTTTTCGTGGTACATATGTGGTAAATAAAGAATATAATATGTGCACAGTACTGGGATTGAACTTTTGCCTGCCTTTGCTTTTCTCTGGTAAATTACTTGTCTTTCGATAG 945 0.528 MLLLFLFLLAPSTSAIDTFIFGGCSQPKFTPGSPYENTVNSLLTSLVNSAAFSNYNNFTLQTASDDDTVYSLFQCRGDLSNDQCSRCVARAVTQLGTLCFSSCGGALQLDGCFVKYDNATFIGVEDKTLVTKKCGPSVGLNSDALTRRDAALAYLQTSDGAYKTFRTSSGFGDFQGVAQCTGDLSPSECQDCLSDSIQRLKTDCGPTTWAEIYLAKCYARYSEGSTRSRANNNDDSNHNDNEIEKTLAILIGLIAGVALIIVFLSFLSKVCEKHKGMYGFRGTYVVNKEYNMCTVLGLNFCLPLLFSGKLLVFR 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2575 314 PANTHER PLASMODESMATA-LOCATED PROTEIN 6 2 275 - -
Aed5g2575 314 Pfam Salt stress response/antifungal 164 222 IPR002902 -
Aed5g2575 314 Pfam Salt stress response/antifungal 24 118 IPR002902 -
Aed5g2575 314 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 2 275 - -
Aed5g2575 314 Gene3D - 141 225 IPR038408 -
Aed5g2575 314 Gene3D - 16 121 IPR038408 -
Aed5g2575 314 ProSiteProfiles Gnk2-homologous domain profile. 126 226 IPR002902 -
Aed5g2575 314 ProSiteProfiles Gnk2-homologous domain profile. 17 121 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2575 Aed-Chr5 26577084 26580872 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2575 4 222 Receptor kinase-like Gene Family AT4G05200 25.957 1.32e-15 75.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2575 5 26577084 26580872 Aed5g2575 5 26577084 26580872 ECH