Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2572 ATGAAGAAATACGTGGGATTTGAGAAATTAAGGTCTGATGAAGTGGCATTAGCTTATTGGATAAGTTTCCTCATAGCAATGGGCGACATGAAAGACAAGATGAAGGGCTTCATGAAGAAAGTCAACAACCCTTTCTCCTCTTCATCATCTGGCAAATTCAAGGGCCAAGGTAGAGTCCTTGGTTCTTCTTCTTCTTCTTCTTCTACACCCTCTAATTCCAATCCTACCCCTCGCCCCACTCCTCCGCATAAACCCTCTTCTTCTCCGGCTGCCACAACAACCAATCCCAAACCCAAACCCTTCTCGCCCCAGAAAACCACCGAGAAGCCTCGCAAAGATGATGGCTTTGACCCCTTTGATTCTTTGCTCACTAACTCCAATAGATCACAAAATGGGTATTCACTCAACGTCTTCGAATGCCCCATTTGTAAACAACCCTTCAGATCCGAAGAAGAGGTGTCTGAACACGTCGATGGTTGTTTGAGCAACCCTGTGGTTGAGCGTCGTGTTGATGATGATGGAAACGGGGTCTCAGATAATGAGAAGACCAATTGTGAATTGGAGGTTTGTGTTGGATCTTACATTTCAGGGAAGCCCTCTGATGGATCGGTTGATATTGTCCTCAAACTGTTAAGGAATATTGGTCGGGAACCGGAGAATGTGAAGTTCAGAAGGATCAGAATGAATAATCCCAAGATTAAAGAGGCTGTTGGTGATGTTGCGGGGGGTGTTGAGTTGCTGAGTTTCGTAGGGTTTGAACTCAGAGAGGAGAATGGCGAGACATGGGCAGTGATGGAGGTTCCCACTGAGGACCAAATCAAATTCATTAAGAAAGCGGTAGTCTTGCTGGAATCACAACTTGTACAAGAACAACCTCCAAAGAGAGAGGCTTCTCCGTCTGCAACTTCTGATGAGATGGCTCCTAAGGCTGAACCAAAGCCCGTCGACAGACAGGTGAAGGTCTTCTTTGCTGTCCCTGAAAGTGTTGCAGCAAAAATTGAGCTACCAGATTCCTTCTATAAGCTTTCAGCTGAAGAGGTCAAAAGAGAAGCTGAACTAAGGAGAAAAAAGATGGCAGATTCTCAGCTTTTAATCCCTAAGTCACTCAAAGAAAAGCAAGCAAAAGCTTCCAGGAAGAGATACACAAAAACTATTATCAGGATTCAATTTCCAGATGGGGTTGTACTTCAAGGTGTATTTGCTCCATGGGAACCAACTACTGCTCTCTACGAGTTTGTCGGCTCAGCATTAAAAGAACCAGGTTTGGAATTCGAGCTAATGCATCCTGTACTAGTCCAACGGCGTGTGATCCCTCATTTTCCAAAAGTAGGGGGAAAAGCTAAAACAATAGAGGAAGAGGACCTGGTACCTTCTGCTCTAATTAAGTTCAAGCCTCGGGAGACAGATTCTGTAGTTTTCACCGGTCTCAGAAATGAATTGCTTGAAATCAGTGAACCACTTGTAAATGGTTAA 1473 0.4453 MKKYVGFEKLRSDEVALAYWISFLIAMGDMKDKMKGFMKKVNNPFSSSSSGKFKGQGRVLGSSSSSSSTPSNSNPTPRPTPPHKPSSSPAATTTNPKPKPFSPQKTTEKPRKDDGFDPFDSLLTNSNRSQNGYSLNVFECPICKQPFRSEEEVSEHVDGCLSNPVVERRVDDDGNGVSDNEKTNCELEVCVGSYISGKPSDGSVDIVLKLLRNIGREPENVKFRRIRMNNPKIKEAVGDVAGGVELLSFVGFELREENGETWAVMEVPTEDQIKFIKKAVVLLESQLVQEQPPKREASPSATSDEMAPKAEPKPVDRQVKVFFAVPESVAAKIELPDSFYKLSAEEVKREAELRRKKMADSQLLIPKSLKEKQAKASRKRYTKTIIRIQFPDGVVLQGVFAPWEPTTALYEFVGSALKEPGLEFELMHPVLVQRRVIPHFPKVGGKAKTIEEEDLVPSALIKFKPRETDSVVFTGLRNELLEISEPLVNG 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2572 490 Gene3D - 198 283 - -
Aed5g2572 490 MobiDBLite consensus disorder prediction 44 73 - -
Aed5g2572 490 MobiDBLite consensus disorder prediction 104 118 - -
Aed5g2572 490 CDD PUB 195 285 - -
Aed5g2572 490 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 2 27 489 - -
Aed5g2572 490 SMART PGNneu 202 269 - -
Aed5g2572 490 Gene3D Classic Zinc Finger 134 165 - -
Aed5g2572 490 Pfam PUB domain 202 274 IPR018997 -
Aed5g2572 490 Gene3D - 373 466 - -
Aed5g2572 490 SUPERFAMILY PUG domain-like 200 285 IPR036339 -
Aed5g2572 490 ProSiteProfiles UBX domain profile. 379 463 IPR001012 GO:0005515
Aed5g2572 490 SUPERFAMILY Ubiquitin-like 351 463 IPR029071 -
Aed5g2572 490 MobiDBLite consensus disorder prediction 290 312 - -
Aed5g2572 490 MobiDBLite consensus disorder prediction 87 102 - -
Aed5g2572 490 MobiDBLite consensus disorder prediction 44 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2572 Aed-Chr5 26569480 26573183 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2572 27 411 C2H2 Transcription Factor Family AT2G01650 57.740 2.57e-146 422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2572 5 26569480 26573183 Aed5g2572 5 26569480 26573183 ECH