Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1538 ATGGATAATAACAACAATGTTCCAATGACCTCCTTATTCCTCACATCAATATTCTTCTTCTTGACAGCATCCATTAGTGCCCAAGAAAACACCACAAAACACGAAGAGTGTAACAAGCCATTCAATTGCGGACAAATATCCATATACTACCCTTTCTGGGGAGGGAACAGACCCAGTTACTGCGCCAGCAACCACAAATTGAAGCTCAACTGCGAGGGTAATCAAAACACCACCATTCAACTCGGCTCACAAAGTTTCCAAGTGCTTCACTTCGATGATCCAGTGCAATACACCATGACATTGGTTCGAACAGGCCTTGTCTATGATCATTGCTCTTCCTCGGCCTTAACCAACACTTCCTTGGACTCATCTCTCTTTAGTTACTTGCCAAATGTTACCAACATCACCATCTTCTATGGTTGTCCTAACTCAATGGTTCCAAATAGCAATAATTACTCTTTTCCATGCAAGGATGGTGGTGGTAATAACAAGAGTGCTTTCTATGGGGACCCTTCAACTGAAAGAGTTCAAGATTGTGAAGGGCCTAGGATTGAAGTGCAAGTAACACAGGAAAATGAGCCTTCGGGTGGAATTGAAGGGCTGAACAAAGCTTTGAGTAAAGGATTTGATGTGCATCTTAATTCAGAGGCTCAAGTTCAACAGTGCTTAGGATGCATTTTGACTAATGGAACATGTGGGGCTGATGATGAGTTTCATGAGTTTTCATGTTTTTGCCCGGATGGTACTGAAGGTTTAGATTGTTCTCATCATAGCGTTTCTGCTGCTGTGCTGAGTGCAATTGTAGTCAGCATTGGCTTTTATATCTATTATAATCGTCAACAGAAGAAGAATCATCATCATCGTCATGCAGTATCATCACCTGTACTATCTAAAGGAACCTCTTATAGCTCTTATTTAGAAGATACTGAGAAGGGAAGCACATACTTTGGAGTCCATTACTTCACTTATAGTGAGCTTGAAGAAGCCACCAACTTCTTTGATCCTGCCAGAGAACTAGGAGATGGAGGATTTGGAAAAGTGTATTTTGGTAAAACTCAATATCAATCCCTTGTTAATTATAACTCTTGA 1089 0.4086 MDNNNNVPMTSLFLTSIFFFLTASISAQENTTKHEECNKPFNCGQISIYYPFWGGNRPSYCASNHKLKLNCEGNQNTTIQLGSQSFQVLHFDDPVQYTMTLVRTGLVYDHCSSSALTNTSLDSSLFSYLPNVTNITIFYGCPNSMVPNSNNYSFPCKDGGGNNKSAFYGDPSTERVQDCEGPRIEVQVTQENEPSGGIEGLNKALSKGFDVHLNSEAQVQQCLGCILTNGTCGADDEFHEFSCFCPDGTEGLDCSHHSVSAAVLSAIVVSIGFYIYYNRQQKKNHHHRHAVSSPVLSKGTSYSSYLEDTEKGSTYFGVHYFTYSELEEATNFFDPARELGDGGFGKVYFGKTQYQSLVNYNS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1538 362 Gene3D Phosphorylase Kinase; domain 1 304 360 - -
Aed5g1538 362 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 11 353 - -
Aed5g1538 362 ProSitePatterns EGF-like domain signature 1. 243 254 IPR000742 -
Aed5g1538 362 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 353 IPR044652 -
Aed5g1538 362 Pfam Wall-associated receptor kinase C-terminal 174 248 IPR032872 -
Aed5g1538 362 Pfam Wall-associated receptor kinase galacturonan-binding 37 102 IPR025287 GO:0030247
Aed5g1538 362 SUPERFAMILY Protein kinase-like (PK-like) 305 353 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1538 Aed-Chr5 19717720 19719749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1538 14 350 Receptor kinase-like Gene Family AT5G38260 23.677 6.70e-19 86.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1538 5 19717720 19719749 Aed5g1538 5 19717720 19719749 ECH