Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1527 ATGTGGCCTACATTAGTGGCTAATAAGATATTCAAGAAGAGACTTGGAAGCAGCAACTTTATAGCAGATTATCCTACTTATAAAGAACCCTTGCTGGGTATTGTAGACATTGATCAGAACTCACAAACCATTCTTAATGATCACAAGGACACACACAAATACAAGGTATTTGTTAGTACATGGAACGTGGGTGGGATTGCACCGGATGAAGATTTGAATATAGATGAATTGTTGGAGACATGCAACAACTCTTGTGACATTTATATACTAGGGTTTCAAGAAATAGTGCCTTTAAAAGCATCAAATGTATTGGGATCCGAAAACAATGAGATTTCTATGAAATGGAATTCCATGATCAGGGAAGCCTTGAACAAGAATGATGACTGTTCCAATAAGAAAGAAAATCCATCTAAGAAGTACTGTGAAGCCCCACATGATCATTTCCAATGTATCATAAGCAAGCAAATGGTTGGAATATTCATATCTGTGTGGATTAGAAGAGATCTTTGTCCTTTCATTCGGCATCCAAGCGTGTCATGTGTTGGCTGTGGCATAATGGGTTGCTTAGGAAACAAGGGTTCTGTATCAGTGAGATTTCAGTTACATGAAACAAGCTTCTGCTTTGTGTGCAGCCATCTAGCTTCAGGGGGCAGAGAAGGTGATGAGAAATACAGAAACTCTAATGTTGCTGAGATTTTTTCACGGACAAGTTTTCCTAGAGGCCCTTTACTTGATTTGCCAAGAACCGTTCTTGATCATGATCATGTAATATTGCTTGGAGATCTAAATTACAGAATTTCACTACCAGAAGAAACGACACGCTTGCTTGTTGAAAAAAGAGACTGGGATTCCTTATTAGAAAATGATCAGCTAATGATGGAGCTAATGAGTGGAAACATGTTAAGAGGATGGCATGAAGGAGCAATCAAATTTGCACCTACCTACAAATATTGTCCAAATTCAGACATTTACTATGGATGTTGCTATCAAGGGAAAAAGACAGAAAAAAGAAGAGCACCAGCGTGGTAA 1029 0.3839 MWPTLVANKIFKKRLGSSNFIADYPTYKEPLLGIVDIDQNSQTILNDHKDTHKYKVFVSTWNVGGIAPDEDLNIDELLETCNNSCDIYILGFQEIVPLKASNVLGSENNEISMKWNSMIREALNKNDDCSNKKENPSKKYCEAPHDHFQCIISKQMVGIFISVWIRRDLCPFIRHPSVSCVGCGIMGCLGNKGSVSVRFQLHETSFCFVCSHLASGGREGDEKYRNSNVAEIFSRTSFPRGPLLDLPRTVLDHDHVILLGDLNYRISLPEETTRLLVEKRDWDSLLENDQLMMELMSGNMLRGWHEGAIKFAPTYKYCPNSDIYYGCCYQGKKTEKRRAPAW 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1527 342 SUPERFAMILY DNase I-like 52 342 IPR036691 -
Aed5g1527 342 Pfam Endonuclease/Exonuclease/phosphatase family 60 264 IPR005135 GO:0003824
Aed5g1527 342 Gene3D Endonuclease/exonuclease/phosphatase 36 342 IPR036691 -
Aed5g1527 342 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 5 342 - -
Aed5g1527 342 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 5 342 IPR045849 GO:0004445|GO:0046855
Aed5g1527 342 SMART i5p_5 52 341 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1527 Aed-Chr5 19618007 19620815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1527 55 342 Acyl Lipid Metabolism Gene Families AT1G65580 28.438 4.91e-31 122
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1527 5 19618007 19620815 Aed5g1527 5 19618007 19620815 ECH