LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed5g1519	ATGGCATTGGGTAGAAAAAGGAGTGTGGAATTGGCATTGCTTCTCTTCTGCTTGTGTTTGGATCTGGGAATAGCGCATCCGCCTCACTCCCATTCCCATTCTGATTTCTGTTCATCCGATGCCGATCGTCACTGCGGAGATGACCATCACCATCACCATGACCATGGGCATGCGCATGGCCATAACAAGGATAAGATTGATGGTAGGTCGAAGCTTCTTCCCGAAGAGTTAGCGGAGGAGGAGGATATGAAACTCTATGGCTTCGGTTTACCCCATCACCATCACCACGATCACGATTTTCAGCCTGCAGAACTCTCCGGTTTAGGCCTTTGGTTGAATGCATTGGGTTGTTCATTTCTGGTGAGCATGGCTTCTCTTTTTTGCTTGATTACCCTGCCTGTAATTTTTGTACAAGGGAAGCCATCAAAGGCTGTTGTCGATTCATTGGCTTTATTTGGGGCAGGAGCTATGTTGGGGGACGCATTTCTTCACCAATTACCACATGCTTTTGGTGGAGAACACTCCCATTCTCATGGTAACCATGGAGATCATGATCATCATGCTAGTTCTGGACATAGGCATTCACATTCCTTAGCCGATCTTTCTATAGGACTATCCATCCTTGCTGGAATTGTTCTCTTTCTTCTTGTAGAGAAGTTAGTGAGGTATGTTGAAGAAAACTCAGGAGGAGCTAATTCCTGGACACATGGACACCACCACCATAACCACAATAGCAAGAAAAAATTGAAAGATGATAGCAGTTCTACTGTCAATTTGCAGTCAGAGTCTAATAATGAAAAAGAAGAGAGGTTGCTGGATGAGAGAAAAGAAGATGATCAAGTGTCACATGACTCCTTGAAGGGAGATGATCCATCTCAATCTGAAACCTCACTCAGAAAGAGAACTGGAAGCAATGTGACCAAAGGTGATAATCTCGACAGTAATACTGTAGATAGCACCACAGATAATGTAAAATCTTTGAATGTTAAGGAACCAGTTAGATCACCAACAAGTCTTGTGTTTGGTTATCTCAATCTTTTCTCTGATGGAGTGCATAACTTCACCGATGGAATGGCTTTAGGAAGTGCATTCCTGCTGTATGGATCTGTTGGTGGCTGGTCTAGAACTCTGTTTTTGCTGGCACATGAGCTTCCTCAAGAGATTGGTGATTTTGGCATTCTGATAAGATCTGGATTCAGCATACCAAAAGCGTTGTTCTTCAACTTTCTGTCAGCACTTGTGGCACTTCTGGGGACTGCATTGGCTCTGCTGTGGGGGAAAGATCCTGGACAGTCATCTTTGATTGAGGGATTTACAGCAGGTGGATTTATATACATAGCAATTGCGGGAGTACTTGCAGAAATGAATAACAGTGAGAAGACAACATTAAGAAGTACATTTGTCCATATAATCTCCCTGACCATGGGCATGGCTGTTGCCCTTGGTATTTCCCTTGTAGAATGA	1464	0.4372	MALGRKRSVELALLLFCLCLDLGIAHPPHSHSHSDFCSSDADRHCGDDHHHHHDHGHAHGHNKDKIDGRSKLLPEELAEEEDMKLYGFGLPHHHHHDHDFQPAELSGLGLWLNALGCSFLVSMASLFCLITLPVIFVQGKPSKAVVDSLALFGAGAMLGDAFLHQLPHAFGGEHSHSHGNHGDHDHHASSGHRHSHSLADLSIGLSILAGIVLFLLVEKLVRYVEENSGGANSWTHGHHHHNHNSKKKLKDDSSSTVNLQSESNNEKEERLLDERKEDDQVSHDSLKGDDPSQSETSLRKRTGSNVTKGDNLDSNTVDSTTDNVKSLNVKEPVRSPTSLVFGYLNLFSDGVHNFTDGMALGSAFLLYGSVGGWSRTLFLLAHELPQEIGDFGILIRSGFSIPKALFFNFLSALVALLGTALALLWGKDPGQSSLIEGFTAGGFIYIAIAGVLAEMNNSEKTTLRSTFVHIISLTMGMAVALGISLVE	487

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed5g1519	487	MobiDBLite	consensus disorder prediction	173	193	-	-
	Aed5g1519	487	Pfam	ZIP Zinc transporter	108	483	IPR003689	GO:0016020\|GO:0030001\|GO:0046873\|GO:0055085
	Aed5g1519	487	MobiDBLite	consensus disorder prediction	263	296	-	-
	Aed5g1519	487	MobiDBLite	consensus disorder prediction	297	329	-	-
	Aed5g1519	487	MobiDBLite	consensus disorder prediction	174	193	-	-
	Aed5g1519	487	PANTHER	ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4	12	487	-	-
	Aed5g1519	487	MobiDBLite	consensus disorder prediction	229	329	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed5g1519	47	436	Organic Solute Cotransporters	AT1G68100	60.891	1.82e-137	401

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed5g1519	5	19529758	19537242	Aed5g1519	5	19529758	19537242	ECH