Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1517 ATGAGGGTATGGGAAAGAGCCAGTGGAGCCATTAAGGACAAGAACAGCATATGGGTTGCAAAGTTCTCAAGAAAGGGTCCATTCCGTAACCCTGATATAGAAAGTGTGATAATCAAGGCAACGAGCCATAACGATAACCACATTGATTCAAAGAACGTGAAAAGAGTGTTCCAATGGCTACGAACCTCACCATTGTACCTTAAACCTATTGTGTGGGCTCTCTCGATGCGCATGCAAAAGACTCGAAGCTGGGTTGTGGGGCTTAAAGGCTTGATGCTCATCCATGGCATTTTCTGCTGCGACATTCCCGCGGTGCAACGCATGGGAAGGTTACCCTTTGACCTATCAAACTTCTCCGATGGCCATTTGAGCCCTGAAAAAGCTTGGAGCTTCAACGGTTTCATTCGTTCTTATTTCGCCTATTTGGATCAGAGGTCGACTTTTATTTCCTCCGAGGTTAAGACCAAGCAGAAGAATATTAATAACAAGAAGGAGGAGATGGAGGGGACGCTGATGGAGGAGCTTGAGAAGTTGCAGGGAATGATCGACATACTTATCCAGATAAGGCCGCGGAACGAAAACTTGAACGTTGGTTTGATTCTTGAGGCTATGGAATGCATTATAGTCGAGGTTTTCGGTGTTTATAGTAAGCTTTGCAACAGGATTGCTAATGTTTTGTTGAGGATATACGAGGTGGGTGGGAAAATGGAAGCGAGTATTGGCCTAAAGGTTCTGCAGAAGGCATCGATTCAAGCGGAGGAAATGTCTTTTTTCTTTGAGTTTTGCAAGGATATTGGGGTCCTCAACGCTTCTCAGTGCCCTAAGATTGATAGAATCTCTAGGGAAGATATTCAAGATCTTGAGAGGTTAATCAGTGGAGCTTCTTCAAAGAAGGATATGGACATGGCCATTGTGGTGAGAGATTGTTATTCAGTTTCGCAGCACCAGAAGAAGTTGTTATCAGAGAATGGTTTAATGACTGTGATCACACACCAATGGGAGGTGTTTGATGATGATTATGTAACAGTTGGCATCACAACCAACCCTTTTGAGGAATCATATTGCAGCAGCCTCGTACCTTATGTTCCTCCTATTCAACAGCATCAAGATTTTCCTGATCTAATTAGTCTGTAG 1134 0.4374 MRVWERASGAIKDKNSIWVAKFSRKGPFRNPDIESVIIKATSHNDNHIDSKNVKRVFQWLRTSPLYLKPIVWALSMRMQKTRSWVVGLKGLMLIHGIFCCDIPAVQRMGRLPFDLSNFSDGHLSPEKAWSFNGFIRSYFAYLDQRSTFISSEVKTKQKNINNKKEEMEGTLMEELEKLQGMIDILIQIRPRNENLNVGLILEAMECIIVEVFGVYSKLCNRIANVLLRIYEVGGKMEASIGLKVLQKASIQAEEMSFFFEFCKDIGVLNASQCPKIDRISREDIQDLERLISGASSKKDMDMAIVVRDCYSVSQHQKKLLSENGLMTVITHQWEVFDDDYVTVGITTNPFEESYCSSLVPYVPPIQQHQDFPDLISL 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1517 377 CDD ANTH_N_AP180_plant 33 148 - -
Aed5g1517 377 Gene3D ANTH domain 153 308 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Aed5g1517 377 Pfam ANTH domain 33 291 IPR011417 GO:0005543
Aed5g1517 377 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 342 IPR045192 GO:0048268|GO:0072583
Aed5g1517 377 Gene3D - 4 152 IPR008942 -
Aed5g1517 377 SUPERFAMILY ENTH/VHS domain 32 149 IPR008942 -
Aed5g1517 377 Coils Coil 157 177 - -
Aed5g1517 377 SUPERFAMILY GAT-like domain 169 292 - -
Aed5g1517 377 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Aed5g1517 377 PANTHER OS08G0467300 PROTEIN 1 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1517 Aed-Chr5 19523307 19524440 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1517 5 19523307 19524440 Aed5g1517 5 19523307 19524440 ECH