Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1516 ATGGAGATGAAGGAGTTGAGACAATCTGGCTGGCATGAACGAGGCAACACCGCTTTCTCTCTCTCTCTCCCGTTCTCTTCTTCTTCTCTCTCCTCTCTCTTCGCCTTTCTCTTTCTCTCTCTTTCAGATTTCTGTCTCTCTCATCTTTCTCTCTCCGGAAGGGTAAACCCTAAAGACCGTTTGCACCCACCAATTGTGATGGATGATGATGTGTTGAACATGCCGAATTGGGGTTATTATGAACCCTTCAGAGGTGGACATCTTGGTCTGCAGCTCATGCCTGGTATGACTGAACGAGACACAAAGCCATTTTTGCCTGGTCGTGATCCGTCTATGTTAATGGGTGCAAATGGAACATTTCACCCTCGAGACTGTGTTGTTTCCGAAGCACCAATGCCATTGAACTATGTCAGAGATAATAATTGGATAAACCAGAGAGATAGGTTCTTTAACATGCAGCAGCCCACAAATCCTAATTATGTTGTTCTTCCGGAGACATCAGGAGCTCCTAACATGCAAATTATACAGCCACCTGATACCTCAAGAGATGTGAAAGTCGAAAGAGTTGAAGAGTTGGTTGTGAAAAAGGAAGGTGGCCAGTCGAAGAAAAGGCACACTAAGGGTGCTCTGTCGACTCCAAAAGCTAAGAAACCTAGGAAGCCAAAGGATAATGGCAATGTTCCGGTTCAACGCATGAAGCCGCCTAAGAAGACTATGGAGCTTGTAATTAATGGAATTGATATGGACATTTCTGGTCTGCCCATTCCGGTATGTTCATGCACTGGGGCTCCTCAGCAGTGTTATCGCTGGGGCTGCGGAGGTTGGCAATCAGCTTGTTGCACCACAAATGTGTCGATATATCCTTTGCCAATGAGCATGAAGAGGCGTGGTGCAAGGATAGCTGGGCGGAAAATGAGCCAAGGTGCTTTTAAAAAGGTTTTAGAGAAACTTGCAGCTGAAAGTTATAACTTTGCTAGCCCTATTGATTTGAAGACTCATTGGGCCAGACATGGCACCAACAAGTTTGTCACTATCAGGTAG 1041 0.4563 MEMKELRQSGWHERGNTAFSLSLPFSSSSLSSLFAFLFLSLSDFCLSHLSLSGRVNPKDRLHPPIVMDDDVLNMPNWGYYEPFRGGHLGLQLMPGMTERDTKPFLPGRDPSMLMGANGTFHPRDCVVSEAPMPLNYVRDNNWINQRDRFFNMQQPTNPNYVVLPETSGAPNMQIIQPPDTSRDVKVERVEELVVKKEGGQSKKRHTKGALSTPKAKKPRKPKDNGNVPVQRMKPPKKTMELVINGIDMDISGLPIPVCSCTGAPQQCYRWGCGGWQSACCTTNVSIYPLPMSMKRRGARIAGRKMSQGAFKKVLEKLAAESYNFASPIDLKTHWARHGTNKFVTIR 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1516 346 MobiDBLite consensus disorder prediction 195 234 - -
Aed5g1516 346 Pfam GAGA binding protein-like family 67 346 IPR010409 -
Aed5g1516 346 PANTHER - 50 346 IPR010409 -
Aed5g1516 346 PANTHER BNAA06G09500D PROTEIN 50 346 - -
Aed5g1516 346 SMART GAGA_bind_2 67 346 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1516 Aed-Chr5 19517572 19519827 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1516 67 346 BBR or BPC Transcription factor family AT2G01930 56.146 7.69e-105 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Aed5g1516 GAGA_bind 2.9e-102 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1516 5 19517572 19519827 Aed5g1516 5 19517572 19519827 ECH