Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1274 ATGAGGGAGGAAGAGATGGAGAAGCTGCGAGGAGTGGTGCGGGACTGCGTGAGCAAGCACCTCTACTCCTCCGCCATCTTCTTCGCCGACAAAGTCGCCGCCTTCACCGCCGACCCTGCCGACATCTACATGCAGGCCCAGGCTCTCTTCCTCGGCCGCCACTACCGCCGCGCCTTCCACCTCCTCAACGCCTCCAAAATCGTCCTCACCGACCTCCGGTTCCGCTACCTCGCCGCCAAGTGCCTCTGCTTGTCGATGCTCGGTGAGGCTAAAGTGGATGACAATGGAAATGTTTATGATACAAAGGACTCTAATGTCATGTACTTGGATAAAGATTGTGAAGATCGTGAAATCAATATATCTTCTGCAATATGTTTCTTAAGAGGCAAAGCATATGAGGCTCTAGAAAACCGTGCCCAGGCCAGACTGTGGTATAAAGCTGCTATAAAAGCGGATCCTTTATGCTATGAGGCTTTGGAATGTCTTATTGAGAATCACATGCTTACATGTGAGGAAGAAGCAAATTTGATCTCATCATTGCAATTTGGTAGTGATGATGGATGGCTCTCTTCATTTTATTCTTGTTTGATAAAGAAGTATGACAAAGAAAATGTTGTAGAAGCCAAGTTCAGAGATCTTGAGAGTGAAAGCTGTAAAAGTGATCAATCAGATTCTTCTTTCTTGCGCACACTGAAATCCAACACTGATTTATTAGCCTGCAAAGCTGAATACTACCATCAGTGTGGTGAATATCAGAAATGTTTTGAGTTAACAAATGTCAAGGCAACTAGTCTAGATGGAACATTTGCCCCTGCATGGATAGGCTATGGGAATGCTTATGCTGCTCAAGAAGAGGGTGATCAGGCTATGTCTGCCTACCGCACTGCAGCTAGATTGTTTCCTGGGTGCCATTTAGCAACTCTTTACATTGGAATGGAATGCATGCGGACTCACAGCTATAAGCTTGCAGAGCAGGCTAAGTCAATTTGCCCCTCAGATCCACTTGTGTATAATGAACTTGGAGTTGTTGCCTATCATATGCAAGAGTACAAGAAAGCAGTGTGGTGGTTTGAGAAAACATTAGCCTTGGTACCAACTGCTTTATCTGAAATGTGGGAGTCGACTGTAGTCAATCTTGCACATGCATACAGAAAGTTGAAGATGTACCTAGAAGCAATTTCATATTATGAGAAAGCACTGGCATTATCAACAAGAAGTGTGAGCACTTATGCTGGTCTTGCATATACTTACCACTTACAGGATGATTTCACCACAGCAATTGAATATTACCACAAAGCCCTGTGGCTGAAACCAGATGACCAATTCTGCACTGAAATGTTAAGTTGGGCTCTAATAGATGAAAGTCGAAGGGGCGTTGATCCCAGTCTTGAATTCCGGTGA 1401 0.4475 MREEEMEKLRGVVRDCVSKHLYSSAIFFADKVAAFTADPADIYMQAQALFLGRHYRRAFHLLNASKIVLTDLRFRYLAAKCLCLSMLGEAKVDDNGNVYDTKDSNVMYLDKDCEDREINISSAICFLRGKAYEALENRAQARLWYKAAIKADPLCYEALECLIENHMLTCEEEANLISSLQFGSDDGWLSSFYSCLIKKYDKENVVEAKFRDLESESCKSDQSDSSFLRTLKSNTDLLACKAEYYHQCGEYQKCFELTNVKATSLDGTFAPAWIGYGNAYAAQEEGDQAMSAYRTAARLFPGCHLATLYIGMECMRTHSYKLAEQAKSICPSDPLVYNELGVVAYHMQEYKKAVWWFEKTLALVPTALSEMWESTVVNLAHAYRKLKMYLEAISYYEKALALSTRSVSTYAGLAYTYHLQDDFTTAIEYYHKALWLKPDDQFCTEMLSWALIDESRRGVDPSLEFR 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1274 466 PANTHER CELL DIVISION CYCLE 16,23,27 261 455 - -
Aed5g1274 466 ProSiteProfiles TPR repeat profile. 373 406 IPR019734 GO:0005515
Aed5g1274 466 SMART tpr_5 334 367 IPR019734 GO:0005515
Aed5g1274 466 SMART tpr_5 407 440 IPR019734 GO:0005515
Aed5g1274 466 SMART tpr_5 122 155 IPR019734 GO:0005515
Aed5g1274 466 SMART tpr_5 373 406 IPR019734 GO:0005515
Aed5g1274 466 SMART tpr_5 235 269 IPR019734 GO:0005515
Aed5g1274 466 SMART tpr_5 270 303 IPR019734 GO:0005515
Aed5g1274 466 ProSiteProfiles TPR repeat profile. 270 303 IPR019734 GO:0005515
Aed5g1274 466 PANTHER CELL DIVISION CYCLE 16,23,27 7 259 - -
Aed5g1274 466 ProSiteProfiles TPR repeat profile. 334 367 IPR019734 GO:0005515
Aed5g1274 466 Pfam Anaphase-promoting complex, cyclosome, subunit 3 19 82 - -
Aed5g1274 466 Pfam Tetratricopeptide repeat 377 434 - -
Aed5g1274 466 PANTHER CELL DIVISION CYCLE PROTEIN 16 HOMOLOG 261 455 - -
Aed5g1274 466 PANTHER CELL DIVISION CYCLE PROTEIN 16 HOMOLOG 7 259 - -
Aed5g1274 466 Pfam Tetratricopeptide repeat 124 153 IPR019734 GO:0005515
Aed5g1274 466 Gene3D Tetratricopeptide repeat domain 5 259 IPR011990 GO:0005515
Aed5g1274 466 ProSiteProfiles TPR repeat profile. 407 440 IPR019734 GO:0005515
Aed5g1274 466 SUPERFAMILY HCP-like 240 441 - -
Aed5g1274 466 Gene3D Tetratricopeptide repeat domain 260 453 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1274 261 439 Glycosyltransferase AT3G04240 24.457 4.27e-06 47.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1274 5 11891487 11904000 Aed5g1274 5 11891487 11904000 ECH