Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed5g1268 | ATGCATGCAGCAGCAAAGAGTGATGTACCAATCATTGCCCCGAAACAACTCCTCGAGGCTGATGGCTTTGTCTTTGGCTTCCCCACAAGATTTGGAATGATGGCGGCTCAGTTCAAAGCATTTCTGGATTCAACCGGAGCTTTGTGGACTACACAACAGCTTGCCGGCAAGCCTGCCGGAATCTTCTACAGCACTAGCTCCCAAGGTAGCGGCCAAGAAACTACCGCGCTAACTGCAATAACTCAGCTGGTTCATCATGGAATGCTGTTTGTTCCAATTGGATACACATTTGGTGCTGGAATGTTCGAGATGTCAGAGCTCAAAGGTGGAAGTCCATATGGCTCAGGAACTTATGCTGGTGATGGTTCAAGACAGCCAACTAAGCTTGAGTTGGAGCAAGCATTCCACCAAGGCAAGTACATTGCCACCATCACAAAGAAGCTCAAGGGAGAAGCTGCATAA | 462 | 0.4848 | MHAAAKSDVPIIAPKQLLEADGFVFGFPTRFGMMAAQFKAFLDSTGALWTTQQLAGKPAGIFYSTSSQGSGQETTALTAITQLVHHGMLFVPIGYTFGAGMFEMSELKGGSPYGSGTYAGDGSRQPTKLELEQAFHQGKYIATITKKLKGEAA | 153 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed5g1268 | 153 | ProSiteProfiles | Flavodoxin-like domain profile. | 1 | 141 | IPR008254 | GO:0010181 | |
| Aed5g1268 | 153 | Pfam | NADPH-dependent FMN reductase | 15 | 94 | IPR005025 | GO:0016491 | |
| Aed5g1268 | 153 | SUPERFAMILY | Flavoproteins | 5 | 149 | IPR029039 | - | |
| Aed5g1268 | 153 | PANTHER | FLAVOPROTEIN WRBA, FLAVOPROTEIN-LIKE DOMAIN PROTEIN-RELATED | 1 | 152 | - | - | |
| Aed5g1268 | 153 | Gene3D | - | 1 | 151 | IPR029039 | - | |
| Aed5g1268 | 153 | PANTHER | FLAVODOXIN-RELATED PROTEIN WRBA-RELATED | 1 | 152 | - | - | |
| Aed5g1268 | 153 | TIGRFAM | flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV | 4 | 148 | IPR010089 | GO:0003955|GO:0010181 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aed5g1268 | Aed-Chr5 | 11790682 | 11791730 | Dispersed/Transposed |