Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1252 ATGACTTCTAGTTGCTTTCATCTTTTCAGAAAGAAAGGATCTTCTTCCTCAGGCACAAAGTTGACTGGAGTTGATATAGATATTTCAGAAATTCAGAATGTCAATATCTACAGTTACAGGGAATTGCGAATTGCCACTGAAGGTTTTAGTTCTGCAAACAAGATAGGGCAGGGAGGTTTTGGAGCAGTCTATAAGGGAAAGCTGAGAAACGGTTCTGTGGTAGCTATAAAGGTTTTATCAGCTGAATCAAGACAAGGGGTCCGTGAGTTCTTGACAGAAATCAAGGTGATCTCTAGTATAGAGCATGAGAATCTAGTTAAGTTAAATGGATGCTGTGTGGAAGACAACCACAGGATTTTGGTGTATGGCTATCTTGAGAATAACAGCCTAGCACAAACACTTATTGTCCCGTTAGCTCACATATTAGCTATCTGTAACATTTCTCAATGTGACCTTGAAGTTGCAACTCAGAAGAGGGACTTATGGGTGAACCGTCCAGAACCTAAGACCTACTTAACCCAAAATCTTTACACGGTTTCAAGGGCTTGTAGCAAACTGCATATAGTACCCTTATCATATATATATTTTGAATTTGATCAGCAAATGAACGTGAAGTTACTGGCTTGGGATTTGTATGAGAGTGGAGAGGCAGAAAAATTGGTGGATGCTTTTCTAGAAGGAGACTTCAACATCAAGGAGGCAGTCAGATTTTGTAAGATTGGTCTCCTTTGCACGCAGGACTCTCCTCAGCTCCGGCCCTCGATGTCCAGTGTGCTTGAGATGCTCTTAGGTGAAAAAGATGTGAATGAGGAGAATGTGACAAAACCAGGCATGATATTTGAATTTGTTGAAGCCAGAAGTGGGAGTAAACAAAAAAGCAAGGCTGAAGTGGATAGTAAATCCTCGTTGACCGAAGGGAAGCAAGACGAGTCATCTTTGTCAAGCTCTTTTGCTACCATGACCTTCACAGCAATATATGATAGAAGCAATTAG 993 0.4099 MTSSCFHLFRKKGSSSSGTKLTGVDIDISEIQNVNIYSYRELRIATEGFSSANKIGQGGFGAVYKGKLRNGSVVAIKVLSAESRQGVREFLTEIKVISSIEHENLVKLNGCCVEDNHRILVYGYLENNSLAQTLIVPLAHILAICNISQCDLEVATQKRDLWVNRPEPKTYLTQNLYTVSRACSKLHIVPLSYIYFEFDQQMNVKLLAWDLYESGEAEKLVDAFLEGDFNIKEAVRFCKIGLLCTQDSPQLRPSMSSVLEMLLGEKDVNEENVTKPGMIFEFVEARSGSKQKSKAEVDSKSSLTEGKQDESSLSSSFATMTFTAIYDRSN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1252 330 MobiDBLite consensus disorder prediction 289 305 - -
Aed5g1252 330 MobiDBLite consensus disorder prediction 289 314 - -
Aed5g1252 330 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 140 - -
Aed5g1252 330 PANTHER RECEPTOR-LIKE KINASE 2 140 - -
Aed5g1252 330 ProSitePatterns Protein kinases ATP-binding region signature. 55 77 IPR017441 GO:0005524
Aed5g1252 330 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 202 318 - -
Aed5g1252 330 Gene3D Transferase(Phosphotransferase) domain 1 186 278 - -
Aed5g1252 330 Pfam Protein tyrosine and serine/threonine kinase 52 137 IPR001245 GO:0004672|GO:0006468
Aed5g1252 330 Gene3D Phosphorylase Kinase; domain 1 23 124 - -
Aed5g1252 330 SUPERFAMILY Protein kinase-like (PK-like) 23 262 IPR011009 -
Aed5g1252 330 PANTHER RECEPTOR-LIKE KINASE 202 318 - -
Aed5g1252 330 ProSiteProfiles Protein kinase domain profile. 49 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1252 Aed-Chr5 11467772 11472031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1252 206 273 Receptor kinase-like Gene Family AT1G53420 38.571 5.37e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed5g1252 PK_Tyr_Ser-Thr 5.7e-16 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1252 5 11467772 11472031 Aed5g1252 5 11467772 11472031 ECH