Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1250 ATGTCCGTTTCATTTTCTCCCACACCTCACACTCCCAACAACATCATGGTGGATTTCACTTGTGCAGCATTTTACCCTCCAACTCCTCTCCCTCGGTTGACCTTTGTGTGTTCCTCCCAAAGGGCTCTCCCCATTGAGGACCTTCTTCAGCTGAGTGTCGCCGATGTGGGGCCCTCAAATGCTGCTGATTATTTGACCAATGGAAATGGGATTGTTGGCCTTGGTGACTCCCTAGGTGAAGAGGTTCTCAAGGAGAGGATTAGAAGATTGAGGATAGGGCTGGCTAACAAAGGGAAAGTTCCTTGGAACAAAGGAAGGAAACACACTGCAGAGACCCGGGAGCGAATCAGGCAGAACTCTAGAGGCTTTGAGGGATCCCAAGGTGAAGTAAGGAAGAAGATGGCTGAACATCCCCATTCTCATAGTATTCAAACCAAGGCAAAGATAAGTGATTCACTGAGGCGTGTTTGGCATGAGCGGCTAAAGTCAAAACGGTTGGTGGAGCAATTTTTGCTTTCATGGGCAGGAAGCATAGCAAATGCAGCCAGGAATGGAGGGATTGGTCAAGAAGAGCTAGATTGGGATAGCTACAATAAAATAAAACAACAGTTGGAGCTCCATCATCTTCTGCAGGCTAAGGAAAAGGGAAAAGAAAAGCTGATGGTAGTTACTGGAGCAAAGAATATCATCCAGTCATGGAGGGAAAACATAGCCAAAGCAGCACAGAGAGGAGGGAGTGGGGAACAAGAACTTGACTGGGATAGCTATGAAAAGATACAAGAAGAAATGGTCTGCCTCCGTCAACTTCAGCGTACTACAGAAAAGGCAAAGGAAAAAGAGATGGCAAGGGTAAAAGCAGAGAAAGAAGCACAGATAAAAGCAATTAAAAGGGTAATCCTCACTCAAAAGAGAAAAGACCATCAAGAGAGGGCTAAGTTAAAAGGGAATATAAAGAGTCATCCCTGCGGAAATGCAAAGGAAGGCAAAGGTTCCTTGGAAGTTACTCAAGAGTTCAAACTTTGCACTAAATTAACTAAGATTTATATAAGTAAGAGCATCAACGGCGAAGTACTAAGAGAAGGAGACGTTTTTAATTCCATTTTTCCAACCCACAATAAATTGGATCTAGAGCTTATCAAGAGAGAAAAAATGCAGAAAGAAGTATCACTTGCAGAACAGATCCAAGCTGCTAGAGACAAAAAAGGCAAACTCCACTGA 1218 0.4392 MSVSFSPTPHTPNNIMVDFTCAAFYPPTPLPRLTFVCSSQRALPIEDLLQLSVADVGPSNAADYLTNGNGIVGLGDSLGEEVLKERIRRLRIGLANKGKVPWNKGRKHTAETRERIRQNSRGFEGSQGEVRKKMAEHPHSHSIQTKAKISDSLRRVWHERLKSKRLVEQFLLSWAGSIANAARNGGIGQEELDWDSYNKIKQQLELHHLLQAKEKGKEKLMVVTGAKNIIQSWRENIAKAAQRGGSGEQELDWDSYEKIQEEMVCLRQLQRTTEKAKEKEMARVKAEKEAQIKAIKRVILTQKRKDHQERAKLKGNIKSHPCGNAKEGKGSLEVTQEFKLCTKLTKIYISKSINGEVLREGDVFNSIFPTHNKLDLELIKREKMQKEVSLAEQIQAARDKKGKLH 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1250 405 Pfam NUMOD3 motif 89 117 IPR003611 GO:0003677
Aed5g1250 405 Coils Coil 269 289 - -
Aed5g1250 405 PANTHER NUMOD3 MOTIF FAMILY PROTEIN, EXPRESSED 227 405 - -
Aed5g1250 405 PANTHER NUMOD3 MOTIF FAMILY PROTEIN, EXPRESSED 78 221 - -
Aed5g1250 405 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-79 SPECIFIC-LIKE PROTEIN 227 405 - -
Aed5g1250 405 SMART seet_6 104 120 IPR003611 GO:0003677
Aed5g1250 405 SMART seet_6 137 153 IPR003611 GO:0003677
Aed5g1250 405 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-79 SPECIFIC-LIKE PROTEIN 78 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1250 Aed-Chr5 11457979 11462365 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1250 5 11457979 11462365 Aed5g1250 5 11457979 11462365 ECH