Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1200 ATGGCAGTAGCAGCAGTTTCATGCTCATGGCTAGCCCTTCCTTCCCAAATGAGGAACCTCTCCTTCACATCATCTTCTTCTTCTCTTTCCGTCTCCAATTCCGCTTCTCTCAGTTTCTCCAGAAACCTCTCTCACCCTCTCTTCTCACAAGGTAACTGTTTGTCGCTGAGTGGCAGCACAGTGCAGAGGCGCGCGGCGTCTGTGGTCTGCGAGGCTGCGCCGAAGAAGGTGGATTCGGCTGTGAAGAGGGCGCGCCAAGCCGAGAAACGCCGCGTTTACAACAAAGCTCGCAAGTCGGAGATTAAAACGCGTACCAAGAAGGTTTTGGAAGCTCTGGAAGTGCTTAAGAAGAAACCAGATGCGCAAGCTGAAGAAATCCTCCCAATTGAGAAGTTGATTGGAGAGGCATACTCAATAATCGACAAGGCTATTAGAGTTGGCACACTACACAGGAACACCGGAGCAAACCGCAAGTCTCGGCTTGCCCGAAGAAAGAAGGCAGTGGAGATGCATCATGGCTGGTACACCCCAGTGGCTCCTAGTGAAGTCAGTGTCTGA 558 0.5179 MAVAAVSCSWLALPSQMRNLSFTSSSSSLSVSNSASLSFSRNLSHPLFSQGNCLSLSGSTVQRRAASVVCEAAPKKVDSAVKRARQAEKRRVYNKARKSEIKTRTKKVLEALEVLKKKPDAQAEEILPIEKLIGEAYSIIDKAIRVGTLHRNTGANRKSRLARRKKAVEMHHGWYTPVAPSEVSV 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1200 185 Hamap 30S ribosomal protein S20 [rpsT]. 65 167 IPR002583 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Aed5g1200 185 Gene3D Ribosomal protein S20 77 183 IPR036510 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Aed5g1200 185 PANTHER 30S RIBOSOMAL PROTEIN S20 2 182 IPR002583 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Aed5g1200 185 Pfam Ribosomal protein S20 78 164 IPR002583 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Aed5g1200 185 SUPERFAMILY Ribosomal protein S20 78 179 IPR036510 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Aed5g1200 185 PANTHER 30S RIBOSOMAL PROTEIN S20, CHLOROPLASTIC 2 182 - -
Aed5g1200 185 TIGRFAM S20: ribosomal protein bS20 76 163 IPR002583 GO:0003723|GO:0003735|GO:0005840|GO:0006412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1200 5 10647314 10650341 Aed5g1200 5 10647314 10650341 ECH