Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1190 GTTGGAGATATTGACCTTTTGGCTGAATTCCTCTTGCTTTGTCCAAATTCCATTCGAGATGTAACCGTTAGAAGTGAGACTGCACTGCAAGTTGCTGTGAAAAATCAACAATATGAGAGTCTTCAAGTCTTGCTTGGTTGGCTCAAGAATACTCCTGTGAAAGATGCTACTCAACAAGAAAAAACACTACTTAATTGGAAGGATGAGACTGGTAATACCATTTTGCACATTTCAGCTCTAACGAATAACTTACAGGTGGTTCGAAGGCTAATAAAGAGCAAGATTACAGATTTGGAGGCAAAGAATCTGGAGAACAAAACAGCATTAGAAATAGCAGCAAGTGAAGATATCAAGAGTATATTAGAAAGCGCCGGAGCAAAACGTGATTCTTCATCATCGATTAATACCAACGCTCCCACCTTTGCAGAAAAACTAAAATCAAAATCGAAGACAACAATGGTGGACAAAATAATCAATTTTTCTACACGCACCAGAAGGGACATAACGGAGGACCAACGCAACGCGTTCCTAGTAGTTGCCACTCTTGTTGCAACCACCACCTATCAGTTTTCATTGAGTCCCCCAGGCGGAGTATATCAGGTTAACGCTGGGGCCAACAACTCCCTCAAGTTCATGGGCACCACTCCACGTGGAAACGTCGGGAGATCAGTTATGTTTGGAGCCGATTTCTTTTTGTTATCGTTGCTGAACATACTTTCCTTTCTAATATCAATTGTAACGATCTTTCTGCTTGTTCCGGGAGGGAGGGTACGTAGAATAATGTTGGTGTCGATGTTTTGGTTCGTCAATTGCTACTTCTATTCTATGTGGGTCATATCCCCTAATAATGTGTGTGTGTTTCTTTATTATTTTTTGTTGTTTTTGGTCAACTTGTTCATGGCGGTGGCATTAGTGTATTATGCGTTTCCAATGGTGTACCAGAGACTTAGATTGGGGAATCTTGCTCAAACGAAAATGATCAAAACAAGAAATATTATATGGGGGCATGTCTGGTAG 1017 0.4081 VGDIDLLAEFLLLCPNSIRDVTVRSETALQVAVKNQQYESLQVLLGWLKNTPVKDATQQEKTLLNWKDETGNTILHISALTNNLQVVRRLIKSKITDLEAKNLENKTALEIAASEDIKSILESAGAKRDSSSSINTNAPTFAEKLKSKSKTTMVDKIINFSTRTRRDITEDQRNAFLVVATLVATTTYQFSLSPPGGVYQVNAGANNSLKFMGTTPRGNVGRSVMFGADFFLLSLLNILSFLISIVTIFLLVPGGRVRRIMLVSMFWFVNCYFYSMWVISPNNVCVFLYYFLLFLVNLFMAVALVYYAFPMVYQRLRLGNLAQTKMIKTRNIIWGHVW 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1190 338 SMART ANK_2a 24 53 IPR002110 GO:0005515
Aed5g1190 338 SMART ANK_2a 70 100 IPR002110 GO:0005515
Aed5g1190 338 PANTHER HOMEOBOX PROTEIN WARIAI 2 302 - -
Aed5g1190 338 Pfam Domain of unknown function 169 267 IPR026961 -
Aed5g1190 338 Gene3D - 1 124 IPR036770 -
Aed5g1190 338 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 2 302 - -
Aed5g1190 338 SUPERFAMILY Ankyrin repeat 7 122 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1190 Aed-Chr5 10507663 10510094 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1190 2 302 Miscellaneous Gene Families AT1G14500 31.962 3.89e-41 147