Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1186 ATGGCTGACATAGAAGGCCTGGCTGAGGCTGCAGGGGCAAGGTTTAGTTCATTGGAGCTCATTGGACAGGGATCGTTCGGCGATGTGTATAAAGGGTTTGACAAGGAGCTCAACAAAGAAGTTGCTATCAAAGTGATTGATTTGGAAGAATCAGAGGATGAAATTGAGGACATTCAGAAGGAAATTTCTGTTCTGTCACAATGTCGATCTCCATACATTACTGAGTATTATGGTTCCTTTCTTAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGAGGCTCTGTTGCTGATCTAGTCCAATCAGGTCCTCCACTTGATGAAATGTCAATTGCTTACATTTTACGTGATTTGCTTCATGCAATTGAGTACCTACATAATGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATTTTATTGACTGAGAAGGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAATTAACAAGAACTATATCAAGGAGAAAGACCTTTGTAGGAACACCATTTTGGATGGCACCCGAGGTTATTCAAAATTCAGAAGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGCATTACTGCAATAGAGATGGCAAAAGGGGAGCCTCCACTTGCTGATCTTCATCCAATGAGAGTGCTTTTCATCATACCCCGAGAGAATCCACCACAACTAGATGAACACTTTTCTCGCTATATGAAAGAATTTGTTTCATTGTGCTTGAAGAAGCTTCCTGCCGAGGCAAGTAGGCCGAGTGCTAAGGAGCTTCTTAGACATCGTTTCATTCGGAATGCTAGGAAGAGTCCAAAGCTTTTGGAGAGAGTAAGGGAGCGTCCAAAGTTCCAAATAAAGGAAGATCAGGAGCTACCTAGAAATGGCCCAAGGGGGATGGGGAATGCATCTGATACTATTAAGGTTGCAAAAGATTTAAGGGGTGACGAAACTAATCAGCCTAGTGGCCAAGGTAAAACCTTGAGAAGTTCTGGGTGGGACTTCAGCATTGGTGGATCACAGGGTACTGGAACCTTTCGTAGTGTGGCACGACCACCTCAGTTTAGAGATAAAAAAACTGAAGTTTCGAGTCAGCAGCAGCAGCTTAACCAAAGAAAAAGTCCAGAGAGTAGCTATCAAGGGGGATCTGGCAATAAAAGTGCACTTAATGAGTCGCTAGAAACTTCTTTTGCAAAAGATCATGGAGTTTCCTACCATGATGAACATCTGGATAATCACCTTGAAGATGATGAATTTTCTGGGAATGGATCAGGAACTGTTGTTATTCGGTCTCCAAGAGGACCACAGCCATCACTGTTTCGTGATCAAAGTTCCCGGAATTTTGTTGTCACACAGTCTAGCAGCAACTATGCTTCTTTTGAAGATGTTTCTGCTACTGGAACTGTTGTTTTGCGTGGCCAGCAAGATGATTCTGATTCTCCACTGACACCAAGGTCTCGACTGGGACTTAATAGCAAAAATTCAAATGCCTCACTGGAAGATAGTGCCACAAATCTTGCTGAGGCAAAGGCTGCTATCCAAGGCGGATTAAGGAAAGTGACTATCCGGGAGAGATTTGCACTTGGAAAACTCAACAATGACGTGCCAGATAGCAGGAGAGATCAAATCTCACGCAACTCTGATTCTTCTAGACCATCTCGTGAATACTTTGATGCACAAAAGGGATTTTCACATTCTATTGACGATGAAGAAAATGCCAAAATAATCTCATCCTCTGCGCCGTTATCTGTTTTGCTTATTCCTTCGTTAAAAGAGGCCATTGTTGATGATCCAGACGGGTCAATATTGCAATTTGTTGTCAATGCTCTTGTAAACATGGAGAGGACAAAGCCCCAATCCTGTGATGTTCTTGTCAAAAAGTTGCTTCAGCAGTTGGCAAGTTCAAAGGAATCTTCATTGAAGGACCTGCAAGAACTAGCTGGCCAAATATTCAGCAAGACCAAGTCAGCTGAAGAAAACCGAAATGCCGAGTCTGATAACAAGAAGAAACAAAGCAAGGAAGTTCATTCAAATAGCAATTTAAGCCCTCTTGCAAGATTTCTTCTCTCAAGGCTTCGCGATAGCTACCCCATTTGCGTCGTCAGCAGACATGGCTCTACTTGCCATTGTCGAGGCAAGAAATTGTTACCTTACCCGTCTCAAACAGCCTATGCAACTTGCGAAGGGGGCGACCTTACTTGTTCATCAACATTTTTTGTTTCATTGGAAGGAGGCTGTGTTAGCAAGCTAAAGATGCTGATGGGTAAGGTTGCCCCCTTTGCGCGCATAGGCTGTTTGAGACAGATGGCAAGGCCAAACCTCAAGGGATCTAAATCAAGCTTGAGCGGACTTGGAAGTTAA 2373 0.4286 MADIEGLAEAAGARFSSLELIGQGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRSPYITEYYGSFLNQTKLWIIMEYMAGGSVADLVQSGPPLDEMSIAYILRDLLHAIEYLHNEGKIHRDIKAANILLTEKGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRYMKEFVSLCLKKLPAEASRPSAKELLRHRFIRNARKSPKLLERVRERPKFQIKEDQELPRNGPRGMGNASDTIKVAKDLRGDETNQPSGQGKTLRSSGWDFSIGGSQGTGTFRSVARPPQFRDKKTEVSSQQQQLNQRKSPESSYQGGSGNKSALNESLETSFAKDHGVSYHDEHLDNHLEDDEFSGNGSGTVVIRSPRGPQPSLFRDQSSRNFVVTQSSSNYASFEDVSATGTVVLRGQQDDSDSPLTPRSRLGLNSKNSNASLEDSATNLAEAKAAIQGGLRKVTIRERFALGKLNNDVPDSRRDQISRNSDSSRPSREYFDAQKGFSHSIDDEENAKIISSSAPLSVLLIPSLKEAIVDDPDGSILQFVVNALVNMERTKPQSCDVLVKKLLQQLASSKESSLKDLQELAGQIFSKTKSAEENRNAESDNKKKQSKEVHSNSNLSPLARFLLSRLRDSYPICVVSRHGSTCHCRGKKLLPYPSQTAYATCEGGDLTCSSTFFVSLEGGCVSKLKMLMGKVAPFARIGCLRQMARPNLKGSKSSLSGLGS 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1186 790 MobiDBLite consensus disorder prediction 280 298 - -
Aed5g1186 790 MobiDBLite consensus disorder prediction 321 352 - -
Aed5g1186 790 MobiDBLite consensus disorder prediction 476 501 - -
Aed5g1186 790 MobiDBLite consensus disorder prediction 537 560 - -
Aed5g1186 790 MobiDBLite consensus disorder prediction 363 392 - -
Aed5g1186 790 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 696 - -
Aed5g1186 790 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 696 - -
Aed5g1186 790 Gene3D Transferase(Phosphotransferase) domain 1 12 300 - -
Aed5g1186 790 MobiDBLite consensus disorder prediction 661 679 - -
Aed5g1186 790 ProSiteProfiles Protein kinase domain profile. 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1186 790 CDD STKc_MST3_like 14 289 - -
Aed5g1186 790 MobiDBLite consensus disorder prediction 417 447 - -
Aed5g1186 790 SMART serkin_6 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1186 790 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Aed5g1186 790 MobiDBLite consensus disorder prediction 280 392 - -
Aed5g1186 790 SUPERFAMILY Protein kinase-like (PK-like) 14 292 IPR011009 -
Aed5g1186 790 MobiDBLite consensus disorder prediction 538 559 - -
Aed5g1186 790 Pfam Protein kinase domain 16 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g1186 790 MobiDBLite consensus disorder prediction 658 682 - -
Aed5g1186 790 Coils Coil 41 68 - -
Aed5g1186 790 MobiDBLite consensus disorder prediction 428 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1186 Aed-Chr5 10387382 10398964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1186 1 695 MAP Kinase Kinase Kinase Kinase AT3G15220 64.051 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Aed5g1186 Pkinase 3.3e-66 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1186 5 10387382 10398964 Aed5g1186 5 10387382 10398964 ECH