Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1184 ATGACGGGCAAAGCAATTCTTCATAAGATGAAGGAAAAAGTCTTAGGCTCATCTGATACTGATTCAGGTAAAGGAAAGAGCAAGATGAAGAAACAGATAACTCATGGCTTTCATTTGGTAAAGGGGAGATCAGGTCATGCCATGGAAGACTATGTTGTTGCTCAATTTAAGCAAGTTGACACCAATGAGTTGGGTTTGTTTGCAATATTTGATGGCCACTCAGGTCACAGTGTACCTGATTACTTGAAGTCTCATTTGTTTGATAACATCATGAAAGAGCCTAACTTCTGGACAGAACCTGCTGATGCTGTGAGGAGAGCATATGGGATAACAGATTCTACTATTTTGGACAAATCAGGTGAATTGGGAAGAGGGGGTTCAACTGCAGTTACAGCAATACTGATCAACTGTCAGAAGCTACTAGTGGCCAACATTGGTGATTCCAGGGCTGTGTTATGCACGAAAGGCGTGGCCAAACAACTGTCAGTGGATCATGAACCAAGCGTAGAGAGTGAAGATATCAAAAACAGAGGTGGTTTTGTGTCAAACTTCCCAGGGGACGTGCCACGTGTCGATGGCCAGTTGGCAGTGTCAAGGGCATTTGGTGACAAAAGCCTGAAGGTACACTTGAGCTCAGAACCATATGTAACCCTGGAGATGATAGAAGATGATGCAGAGTTTCTTATACTAGCCAGTGATGGCTTATGGAAGGTTAAGGATGCTCGGTCTGCAGCAAAGGTCCTTACTGAAGAAGCAAAGAGCAGGAAAAGCTCAGATGATATCTCTTGCGTTGTTGTGAAATTTCAGTGA 810 0.4358 MTGKAILHKMKEKVLGSSDTDSGKGKSKMKKQITHGFHLVKGRSGHAMEDYVVAQFKQVDTNELGLFAIFDGHSGHSVPDYLKSHLFDNIMKEPNFWTEPADAVRRAYGITDSTILDKSGELGRGGSTAVTAILINCQKLLVANIGDSRAVLCTKGVAKQLSVDHEPSVESEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKVHLSSEPYVTLEMIEDDAEFLILASDGLWKVKDARSAAKVLTEEAKSRKSSDDISCVVVKFQ 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1184 269 CDD PP2Cc 35 268 IPR001932 -
Aed5g1184 269 Gene3D - 13 269 IPR036457 -
Aed5g1184 269 ProSiteProfiles PPM-type phosphatase domain profile. 34 268 IPR001932 -
Aed5g1184 269 SMART PP2C_4 24 266 IPR001932 -
Aed5g1184 269 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 269 - -
Aed5g1184 269 PANTHER PROTEIN PHOSPHATASE 2C 1 269 IPR015655 GO:0004722|GO:0006470
Aed5g1184 269 SUPERFAMILY PP2C-like 29 268 IPR036457 -
Aed5g1184 269 Pfam Protein phosphatase 2C 48 267 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1184 Aed-Chr5 10355072 10359460 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1184 1 269 PP2C-type Phosphatase Gene Family AT3G15260 73.356 2.62e-154 430
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1184 5 10355072 10359460 Aed5g1184 5 10355072 10359460 ECH