Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1182 ATGGTGGGCTCAGCAACAACAACAGCAACAGATAGAAGCAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAGAAGTGTGTGTTTCAACACAGATTGGACTTACTCTGTTTTCTGGACCATTCGTCCTCGCCCAAGAGTCAGAGGTGGCAATGGGTGCAAGGTTGGGGATGATAACGGAAGCTTAATGTTGATGTGGGAAGATGGGTTTTGCCGAGGAAGGGTTTCAGATTGTTTGGAAGAGATTGATGGAGAGGATCCTATCAGGAAATCATTTAGCAAAATGTCCATTCAGTTATATAATTATGGAGAAGGGTGGGTACTGGGTAGGTTGATGGGAAAGGTTACATCTGATAAGTGCCACAAATGGCTTCCTCCTGAATGGATAGATCAGTTTGAGTCAGGCATTCAGACAATAGCTGTGATTCAAGCTGGGCATGGCCTTCTGCAACTTGGTTCTTGCAAGATTATTCCTGAAGACCTCCATTTTGTGCTAAGAATGAGACACACATTTGAATCTCTAGGCTATCAATCAGGGTTCTACCTCTCCCAACTCTTCTCTTCAACAAGGAGCACATCCTCTTCCACTTCCCTTCCTACAAAACCATCCACCATTCCAATAAGGCCACCCTCTTCACTCCTCAACTGGGGTCAAAGGCCACTTGGATCATCTTCCACTACTTCTTTGCTACCCTCTCCCACCTTTCAACATGCAGCCGCTGCCGCCAGAATGGGGTTATTCCCACAGGCCAAAGATGATGAGACACACATGTTCCTCATGCCTCATGCATCATCATCAGAACATCATGCTAGAATGGGAGACATCATGGGAGAGCATGAGAGTGACATAAAGTGGCCAAATGGCTTATCAATCTTCAATGCAATCACCGGAAGATCTGATGATGCCAAGCTCTTGTTCAATCAAGAGAGCTCGGGTGGAGATCACAACAATCACCACCATCACTCTCTCGACCCGAATGCCGGCATGGCAAACCCGAATGAGATCTTGAGCTTGGATGGAGGGGCAAGGAAAGTGGACAAGTTCAAGAGGTGCTTCACTCTACCTTCTAGAGTGGCTTCATCCTCATCTTCTACTTCAATGGATCATCATCATCATCACCTTCAACAACAAGCAGGTGTGGAGTATAATAGGAATTCTTCGGAAGGAGGCTTGTACCAGGATGTCATGGAGACCTTTTTGGAGTGA 1215 0.4658 MVGSATTTATDRSSKEAVGMMALHEALRSVCFNTDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRVSDCLEEIDGEDPIRKSFSKMSIQLYNYGEGWVLGRLMGKVTSDKCHKWLPPEWIDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRSTSSSTSLPTKPSTIPIRPPSSLLNWGQRPLGSSSTTSLLPSPTFQHAAAAARMGLFPQAKDDETHMFLMPHASSSEHHARMGDIMGEHESDIKWPNGLSIFNAITGRSDDAKLLFNQESSGGDHNNHHHHSLDPNAGMANPNEILSLDGGARKVDKFKRCFTLPSRVASSSSSTSMDHHHHHLQQQAGVEYNRNSSEGGLYQDVMETFLE 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1182 404 MobiDBLite consensus disorder prediction 362 382 - -
Aed5g1182 404 PANTHER GB|AAF34833.1 127 404 - -
Aed5g1182 404 MobiDBLite consensus disorder prediction 309 330 - -
Aed5g1182 404 PANTHER GB|AAF34833.1 1 127 - -
Aed5g1182 404 PANTHER GB|AAF34833.1 127 404 IPR044170 -
Aed5g1182 404 PANTHER GB|AAF34833.1 1 127 IPR044170 -
Aed5g1182 404 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 23 174 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1182 Aed-Chr5 10336621 10341959 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1182 24 177 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.953 4.59e-17 81.6