Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0760 ATGTCCAACACTCTGCAGCAACAACATCAACAGCTACAGAGTCAGAGTCCTGAATCCAAGCGGCTCGATCCGGGTTCCAAAGCTTCCCGGCCCGGACACCGGAGAACGGTATCCGCCGGAGCTCCGTTAATCTACTCCGGCGGAGCCACGTTACTTCCGACCGGGAACATTTGCCCGACCGGAAAGATCCTCAAACCGGGTTTGCCCTCTCGCGGGCCGAACCGGACCGACGTGCTGGGCTTGGGCACCGTGAACTACGGCCGGGGCAGCATAGTGCGCGGCGGAGGCTCGGGCAATAATCCAGTGCCCGCGGGCGCATCGCAGCTTACGGTGAAGCGCGCGCTCAGCGGCTCCGATCCCGAGGAAGTGAAGAGGGCCGGGAACGAGCTGTACAAAGGCGGGAACTTTGTGGATGCGCTGGCATTGTACGATCGCGCAGTCGCCATCTCGCCGGGAAACTCCGCGTGCCGGAGCAACCGCGCGGCGGCGCTCACGGCGCTCGGGAGGCTCGGCGAGGCCGCGAGGGAGTGCCACGAGGCGGTGAAGCTGGAGCCTGCTTATGCCAGAGCGCACAAGAGACTTGCTTCACTTTACTTAAGGTTTGGGCAGATTGAGAATTCACGGCGGCACCTCTGTCTCTCTGGGTTTCAAGAGGATCACTCTGAGGAGCAGAAGCTGGTGTTGTTGGAGAAACATTTGAATCGGTGTGCTGATGCGCGAACATTTGGTGATTGGAAGAGGATTGTTGCTTGCAAGGCAGAAGCGTATTTAAAACTGCATCAACTTGAGGATGCTGAATCCAGTCTCTTGAACGTTCCGAAGTTGGAAGGCTGTCCTCCAGCATGTTCTCAAATCAAGTTCTTTGGTATGGTTGGTGAAGCCTATGTTCCTTTTGTATCTGCTCAGGTTGAAATGGCCCTGGGGAGGTTTGAGAATGCTGTTGTGGCAGCAGAAAAGGCCAGCGTGTTAGATCACAGCAGTGTTGAAGTTGGTAGGATTGTAAATGTTGTGAAAATGGTTGCAAGAGCTCGTTCCAGGGGCTATGATCTTTTCAGCTCTGGCAAGTTTTCCGAAGCATGTTCTGCTTATGGAGAGGGCCTTAAGTATGACAACTCCAACTATGTTCTATATTGCAATAGGGCTATTTGTTGGTCTAAACTAGGACTGTGGGAACAATCGGTTCAAGACTGTAACCAAGCTCTTAACATTCAACCAAATTACACCAAAGCCCTTTTCCGCAGGGCTGCGTCAAACACAAAGCTTGAAAGATGGCAAGAAGTTGTTAAAGATTACCAGGCCTTAAAACGCGAACTCCCTAAAGACAATGAAGTTGATAAGTCTCTTTGTCAGGCTCAACTAGAATTAGAAAAATCTCGACAAATGGTGTATGGTACTAAGTTTGGAGTTGAAGTTGAACAAATCTCTGCATTAGATAAATTTAAAGCTGCAGTTGCCTCTGCAGGTGTATCGGTAGTATATTTCACAGAAGCATCAAACGAACTATGTGAGGAGTTATCTCCATTCATAAATACATTATGTGTTAGATATCCCTCAGTTAAATTTATCAAGGTGGACGTGGAGGAGTGTCTAGCAATATCAAAAGCTGAAAGCATAAGAAGTGTACCAACTTTTAAAATTTATAAAAATGGGGAGAAGGTGAAGGACATGATCCGGCCAACACATCAGTTATTAGAGGACTCAGTTAGAAAAAGTAGTAGTCTCTAG 1725 0.4957 MSNTLQQQHQQLQSQSPESKRLDPGSKASRPGHRRTVSAGAPLIYSGGATLLPTGNICPTGKILKPGLPSRGPNRTDVLGLGTVNYGRGSIVRGGGSGNNPVPAGASQLTVKRALSGSDPEEVKRAGNELYKGGNFVDALALYDRAVAISPGNSACRSNRAAALTALGRLGEAARECHEAVKLEPAYARAHKRLASLYLRFGQIENSRRHLCLSGFQEDHSEEQKLVLLEKHLNRCADARTFGDWKRIVACKAEAYLKLHQLEDAESSLLNVPKLEGCPPACSQIKFFGMVGEAYVPFVSAQVEMALGRFENAVVAAEKASVLDHSSVEVGRIVNVVKMVARARSRGYDLFSSGKFSEACSAYGEGLKYDNSNYVLYCNRAICWSKLGLWEQSVQDCNQALNIQPNYTKALFRRAASNTKLERWQEVVKDYQALKRELPKDNEVDKSLCQAQLELEKSRQMVYGTKFGVEVEQISALDKFKAAVASAGVSVVYFTEASNELCEELSPFINTLCVRYPSVKFIKVDVEECLAISKAESIRSVPTFKIYKNGEKVKDMIRPTHQLLEDSVRKSSSL 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0760 574 Gene3D Glutaredoxin 459 572 - -
Aed1g0760 574 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 10 570 IPR044534 -
Aed1g0760 574 CDD TRX_family 480 565 - -
Aed1g0760 574 Pfam Thioredoxin 478 560 IPR013766 -
Aed1g0760 574 SUPERFAMILY Thioredoxin-like 383 567 IPR036249 -
Aed1g0760 574 SUPERFAMILY TPR-like 115 457 IPR011990 GO:0005515
Aed1g0760 574 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN TTL4 10 570 - -
Aed1g0760 574 MobiDBLite consensus disorder prediction 1 41 - -
Aed1g0760 574 Gene3D Tetratricopeptide repeat domain 118 458 IPR011990 GO:0005515
Aed1g0760 574 Pfam Tetratricopeptide repeat 126 175 - -
Aed1g0760 574 SMART tpr_5 120 153 IPR019734 GO:0005515
Aed1g0760 574 SMART tpr_5 374 407 IPR019734 GO:0005515
Aed1g0760 574 SMART tpr_5 408 441 IPR019734 GO:0005515
Aed1g0760 574 SMART tpr_5 340 373 IPR019734 GO:0005515
Aed1g0760 574 SMART tpr_5 294 327 IPR019734 GO:0005515
Aed1g0760 574 SMART tpr_5 154 187 IPR019734 GO:0005515
Aed1g0760 574 MobiDBLite consensus disorder prediction 1 22 - -
Aed1g0760 574 ProSiteProfiles TPR repeat profile. 120 153 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0760 Aed-Chr1 8598117 8601070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0760 134 205 Glycosyltransferase AT3G04240 33.333 2.68e-06 48.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0760 1 8598117 8601070 Aed1g0760 1 8598117 8601070 ECH
Aed5g1262 5 11674166 11678174 Aed1g0760 1 8598117 8601070 PCT