Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0534 ATGGCAACTGCTCCATCTGATGTGCTTGCAGTTGAGCTTCTTCAGCGCGAATGCCACATCAAGCGTCCTTTAAGAGTTGTGCCATTGTTTGAGAAGCTTGCTGATCTAGAGGCTGCTCCTGCTGCTTTGGCTCGGTTGTTCTCGGTAGATTGGTACAAAAATAGGATCAATGGGAAGCAAGAAGTGATGATTGGATACTCAGACTCAGGAAAAGATGCTGGGAGGTTCTCTGCAGCATGGCAGCTATATAAGGCTCAGGAGGAGCTTATAAATGTTGCCAAGAAATTTGGTGTTAAGCTAACCATGTTCCATGGTCGCGGTGGAACCGTTGGAAGAGGAGGTGGACCTACTCATCTTGCTATTTTGTCTCAACCTCCTGACACAATCCATGGCTCACTTCGTGTGACAGTCCAAGGTGAAGTCATTGAGCAATCCTTTGGAGAACAACACTTGTGCTTTAGAACACTACAACGTTTCACAGCTGCCACTCTAGAACATGGCATGAACCCCCCAATTTCTCCAAAACCAGAATGGCGTGCTTTGATGGATCAGATGGCTGTCATTGCTACTGAGGAATACCGTTCTATTGTATTCAAGGAGCCGCGCTTTGTTGAGTATTTCCGCCTGGCTACACCAGAGTTGGAGTATGGCAGGATGAATATTGGAAGTCGACCAGCAAAGAGAAAGCCTAGTGGAGGCATTGAAACACTGCGTGCAATACCTTGGATCTTTGCATGGACACAGACAAGGTTTCATCTTCCAGTGTGGCTAGGCTTTGGAGCAGCATTTAAAAAAGTCATTGAGAAACAATCTAAGAATCTCAAAATGCTGCAAGAGATGTACAATCAATGGCCTTTCTTTAGGGTCACACTTGATTTGGTGGAAATGGTGTTTGCCAAAGGAGATCCAAAAATCGCTGCTCTGAATGATAAGCTCCTTGTTTCAAAGGACCTGTGGCCGTTTGGGGATCAATTGAGGAACAAATATGAAGAAACTAAGAAACTCCTACTTCAGGTGGCTGGACACAAGGAAATCCTTGAAGGGGACCCTTACTTGAAGCAAAGGCTGACGCTTCGCCATTCTCCGATTACCACCCTCAATCTTTTCCAAGCATACACATTGAAACGCATCCGTGATCCTAACTACAACGTGAAGGTTCGCCCCCGCATGTCAAAGGAGTCTTTAGAGGCAAGCAAATCAGCTGATGAACTTGTGACACTGAACACAACAAGTGAGTATGCTCCTGGTTTGGAAGACACACTCATTCTCACTATGAAGGGTATTGCTGCTGGCATGCAGAACACTGGTTAA 1311 0.4577 MATAPSDVLAVELLQRECHIKRPLRVVPLFEKLADLEAAPAALARLFSVDWYKNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELINVAKKFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEQHLCFRTLQRFTAATLEHGMNPPISPKPEWRALMDQMAVIATEEYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPAKRKPSGGIETLRAIPWIFAWTQTRFHLPVWLGFGAAFKKVIEKQSKNLKMLQEMYNQWPFFRVTLDLVEMVFAKGDPKIAALNDKLLVSKDLWPFGDQLRNKYEETKKLLLQVAGHKEILEGDPYLKQRLTLRHSPITTLNLFQAYTLKRIRDPNYNVKVRPRMSKESLEASKSADELVTLNTTSEYAPGLEDTLILTMKGIAAGMQNTG 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0534 436 PRINTS Phosphoenolpyruvate carboxylase signature 102 131 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aed1g0534 436 PRINTS Phosphoenolpyruvate carboxylase signature 234 260 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aed1g0534 436 PRINTS Phosphoenolpyruvate carboxylase signature 60 80 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aed1g0534 436 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 436 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aed1g0534 436 Pfam Phosphoenolpyruvate carboxylase 1 436 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aed1g0534 436 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 1 436 IPR015813 GO:0003824
Aed1g0534 436 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 62 74 IPR033129 -
Aed1g0534 436 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0534 Aed-Chr1 6925563 6931892 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0534 1 6925563 6931892 Aed1g0534 1 6925563 6931892 ECH
Aed1g0534 1 6925563 6931892 Aed5g1264 5 11714511 11722559 PCT