Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0908 ATGTCATCACAAACCACCGCCACGGAGGCGCCGGATCCCCACACGCCGCTTCTCCGCTCCCGCGCCGACGCCAGCCGAGCCCCCGCGCTCGCGCTCCTGCTCGGCCGCCGCGGCCCCTCCATGCTGGTGCGGGAGACGGCTGCGCGTCAGCTCGAGGAGCGCCGCGCCGACTGGGGCTACTCCAAGCCGGTGGTGGCGCTCGACATGTCGTGGAACATGGCCTTCGTCGTCGTCTCGGCGGCGATGCTCGCGTGCACCACCGCCGAGCGACCGAACACACCGATCCGCGTGTGGATCGTCGGCTACGCGCTGCAGTGCCTCGTCCATGTGGTGCTCGTGTGGCTCGAGTACCGGCGCCGGAGCCGGGGAGACTCTCGCCGCGGCCAGAGGGTGCTGGACGTGGAGAGCGACGGTGGCAGCGACGACGCAGATGGGAGCTCTGGCAACTCGTCTCGCTCAAGATTCACAAAACGATGTGAATCGTTAAATACTGGGGTTTCTTTCCTTTGGTGGATAGTGGGCTTTTATTGGGTTGTCTCTGGTGGTGATATACTGTTGCAAGATGCCCCACGATTGTACTGGTTGGCTGTTGTCTTTCTGGCATTTGATGTCTTTTTTGCCATCTTTTGCGTTGTCTTGGCATGCTTGATTGGCATTGCTCTCTGTTGTTGTTTGCCTTGCATCATTGCTATTCTCTATGCTGTTGCTGGACAGGAAGGTGCATCAGAAGCAGATCTCAGCATGCTTCCAAAATATAGATTTCGAATATTAAGCAATGAGGATAAGCCTAGTGGTGGAGCTGGATCAATGGTTCCCATAGAAACCAGCAGTGCTTGCTTGGCAAATGAACAAACACTTTTATCTGAGGATGCGGAATGCTGTATATGCCTCTGTTCATATGAGGATGGAGCAGAGCTGCATGCTCTTCCCTGCAACCATCATTTCCATTCTTCATGCATTGTTAAATGGCTGAAGATGAATGCAACTTGTCCTCTCTGCAAGTACAATATTCTCAAGGGAAATGAACAAGTGTGA 1035 0.5527 MSSQTTATEAPDPHTPLLRSRADASRAPALALLLGRRGPSMLVRETAARQLEERRADWGYSKPVVALDMSWNMAFVVVSAAMLACTTAERPNTPIRVWIVGYALQCLVHVVLVWLEYRRRSRGDSRRGQRVLDVESDGGSDDADGSSGNSSRSRFTKRCESLNTGVSFLWWIVGFYWVVSGGDILLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPKYRFRILSNEDKPSGGAGSMVPIETSSACLANEQTLLSEDAECCICLCSYEDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0908 344 PANTHER TARGET OF ERK KINASE MPK-1 9 344 - -
Aed11g0908 344 ProSiteProfiles Zinc finger RING-type profile. 293 334 IPR001841 -
Aed11g0908 344 Pfam Ring finger domain 292 334 IPR001841 -
Aed11g0908 344 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 272 339 IPR013083 -
Aed11g0908 344 CDD RING-H2_PA-TM-RING 292 334 - -
Aed11g0908 344 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 9 344 - -
Aed11g0908 344 SUPERFAMILY RING/U-box 281 338 - -
Aed11g0908 344 SMART ring_2 293 333 IPR001841 -
Aed11g0908 344 MobiDBLite consensus disorder prediction 130 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0908 Aed-Chr11 14568337 14574794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0908 6 343 C3H Transcription Factor Family AT1G68070 67.630 2.13e-171 478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0908 11 14568337 14574794 Aed11g0908 11 14568337 14574794 ECH