Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0907 ATGTCTGCCTCCAATGCTCTCAGATCATCAAAACTTGTGTCATGGAAACCCCGGCGCGGCGAGGCGTTGCATTCGGGAAAGGTTTCGACGGTGAGACTGTGTCCCGAACTCGCTGCCCGGGGCAGACACTTCGATTTTCGGTCCAATTCGGTTCCCGCCTCGGTCGAGTTCGCGCAGGTTTCGCCTCTTTGCACCATTCTGTGCAAAGACGGGTTCCGGATTCGGACCGTGGAACACTTGCTTTCTGCTTTGGAGGCTGCGGGCGTCGATAATTGCAGGATCGAGATTGAGGATTCCGATGCTCAAGGACGCGACGCAGAGATTCCTATATTTGATGGGTCAGCAAGGGAATGGGTGGCAGCAGTGGAAGAAGTTGGTTTAACGGTGGCCAACAATCTTGATGGCAAAAGTGTTGAGAAAATGGCAGCACATGTAAATGAACCAGTGTATGCTTGGAGAAATGATTCTTTTCTTGCTGCATTTCCTTCAGAAGTGGTTAGAATAACTTATGGCATCAACTTTCCGCAGGCACCTGCTATTGGCTGCCAGTGGTTTTCTACACCCCCCTTGGATAATTTGGTTTATTCCAAGCAGATAGCTTTGTCAAGAACCTTCTGCATTTATGAGGAGGTTGAGCAAATGCGCAATGCTGGACTTATCAAAGGAGGTTCTCTAGAAAATGCCCTTGTGTGCAGTGCCAGTAAAGGTTGGTTGAATCCACCTCTGCATTTCAGTGATGAACCATGTCGTCACAAGATCTTGGACCTTATTGGTGATCTATCACTGTTTGCTCAGTTTGGGAATCAAGGACTCCCGGGTGGTCATGCACTGCATGCTGATTTGGCACGGCGCCTGTTAGGGGAATGA 867 0.4948 MSASNALRSSKLVSWKPRRGEALHSGKVSTVRLCPELAARGRHFDFRSNSVPASVEFAQVSPLCTILCKDGFRIRTVEHLLSALEAAGVDNCRIEIEDSDAQGRDAEIPIFDGSAREWVAAVEEVGLTVANNLDGKSVEKMAAHVNEPVYAWRNDSFLAAFPSEVVRITYGINFPQAPAIGCQWFSTPPLDNLVYSKQIALSRTFCIYEEVEQMRNAGLIKGGSLENALVCSASKGWLNPPLHFSDEPCRHKILDLIGDLSLFAQFGNQGLPGGHALHADLARRLLGE 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0907 288 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 18 283 IPR004463 GO:0008759|GO:0009245
Aed11g0907 288 Gene3D lpxc deacetylase, domain 2 143 288 IPR011334 GO:0008759|GO:0009245
Aed11g0907 288 TIGRFAM lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 20 286 IPR004463 GO:0008759|GO:0009245
Aed11g0907 288 SUPERFAMILY Ribosomal protein S5 domain 2-like 17 129 IPR020568 -
Aed11g0907 288 Gene3D lpxc deacetylase, domain 1 12 133 IPR015870 GO:0008759|GO:0009245
Aed11g0907 288 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 19 286 IPR004463 GO:0008759|GO:0009245
Aed11g0907 288 SUPERFAMILY Ribosomal protein S5 domain 2-like 147 286 IPR020568 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0907 19 285 Carbohydrate Esterase AT1G25054 65.455 8.41e-133 377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0907 11 14559797 14566937 Aed11g0907 11 14559797 14566937 ECH