Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0904 ATGATTATGGACTCAAACTCAAACACCATGTGCTTCATAACCCACCAATCCATTTTCAACGCGGTTCGATGTGGGGACCTTGAAGGGCTCAAGGAGCAGCTGAAGAACACGGATGATGGTGGTGAGTCATCATCATCAGAGGGGGTTTCTGAGGTTATGTCTATGCAGAACGATGCAGGGGAAACCATGTTGTACATAGCTGCAGAGATTGGTCTTTGTGAGGTGTTCAGATTCTTGCTTGGTTTATGTGACGTGGAGGTTCTCAAGATCAGGGCTAAATCGGATATGAACCCCTTTCATGTTGCAGCCAAACTTGGCCATTTGGATATTGTAAGGGAAATTTTGAGTACTTGGCCTGAGGCTTGTAAGTTATGCGACTCCTCTAACACTAGTCCTCTATATTTCGCTGCTGTTGGAGATCATTTGGATGTAGTGAGTGCAATATTGGATGTCGATGCAAGCTCAATGATGATAGTAAGGAAAAATGGCAAAACTGCATTGCACAATGCTGCTAGATATGGCTTCCTTTGCATTGTAAAAGCACTGATTGCCCGAGATCCTGGAATAGTCTGCATCAAAGATAAAAAGGGTCAAACTGCACTGCATATGGCTGTGAAAGGACAAAGTACTTCAGTGGTGGAGGAGATATTACAAGCTGACCTTGCGATATTGAATGAACGAGATAAGAAGGGTAACACAGCTCTTCACATGGCTACCAGGAAATGCCGGTCACAGATAGTGAACCTTTTATTAACCTACACAGCTCTGAGTGTCAATGCCATCAATAATCAGAAGGAAACAGTGTTGGATTTGGCGGATAAATTGCGATATGGAGATCCAGCTTTGGAAATCAAGGAGGCCCTTGCAGAATGTGGTGCCAAGTATGCCAGGCATATTGGGAAAGTGGATGAAGCCATGGAACTAAAAAGAGCCGTGAGTGACATAAAGCATGAGGTGCAGTCACAGCTTATACAGAATGAAAAAACTCGCAAAAGAGTCTCCGGTATTGCTAAGGAATTGAAGAAAATCCATAGAGAGGCAGTTCAAAACACCATCAATTCTGTCACTTTAGTAGCCGTCCTTTTTGGCTCAATAGCATTCATGGCCTTGTTCAGTCTACCCGGCCAATATCAAAAGAAGCAACCGGAGGCAGGGATGGCAAATATAGTTGATGATGCCGCCTTCAGTGCTTTCTGCCTTTTGAATGCCACGGCTCTTTTCATTTCACTTGCAGTTGTTGTTGTCCAAATCACTTTGGTGGCTTGGGATACTGGGGCTCAAAGGAAGGTTGTGTCGGTGATTAACAAGCTGATGTGGGCTGCATGTGCCTGCACTTGTGGGGCTTTCCTTGCTATATCTTTTGTGATTGTTGGAAAGGAAATATGGCTGGCTATTAGTGTCACACTTTTGGGGGCACCAATTCTACTTGGGACACTAGCATACTTATGCTACTTTGTTTTTCGGCAGCGTTTTGGACCCCGCGGCAATTCCCAGAGATTAGTCAAGAGACCAAGTGGGAGCAAATCATTCTCATGGTCTTACTCAGTTAATATATCAGATGTGGATGATTATGAATCTGATCTTGAGAAGATGTATGCTCTATAA 1605 0.4399 MIMDSNSNTMCFITHQSIFNAVRCGDLEGLKEQLKNTDDGGESSSSEGVSEVMSMQNDAGETMLYIAAEIGLCEVFRFLLGLCDVEVLKIRAKSDMNPFHVAAKLGHLDIVREILSTWPEACKLCDSSNTSPLYFAAVGDHLDVVSAILDVDASSMMIVRKNGKTALHNAARYGFLCIVKALIARDPGIVCIKDKKGQTALHMAVKGQSTSVVEEILQADLAILNERDKKGNTALHMATRKCRSQIVNLLLTYTALSVNAINNQKETVLDLADKLRYGDPALEIKEALAECGAKYARHIGKVDEAMELKRAVSDIKHEVQSQLIQNEKTRKRVSGIAKELKKIHREAVQNTINSVTLVAVLFGSIAFMALFSLPGQYQKKQPEAGMANIVDDAAFSAFCLLNATALFISLAVVVVQITLVAWDTGAQRKVVSVINKLMWAACACTCGAFLAISFVIVGKEIWLAISVTLLGAPILLGTLAYLCYFVFRQRFGPRGNSQRLVKRPSGSKSFSWSYSVNISDVDDYESDLEKMYAL 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0904 534 PANTHER ANKYRIN REPEAT PLANT-LIKE PROTEIN 4 534 - -
Aed11g0904 534 SUPERFAMILY Ankyrin repeat 18 277 IPR036770 -
Aed11g0904 534 SMART ANK_2a 230 260 IPR002110 GO:0005515
Aed11g0904 534 SMART ANK_2a 59 87 IPR002110 GO:0005515
Aed11g0904 534 SMART ANK_2a 196 226 IPR002110 GO:0005515
Aed11g0904 534 SMART ANK_2a 162 191 IPR002110 GO:0005515
Aed11g0904 534 SMART ANK_2a 128 158 IPR002110 GO:0005515
Aed11g0904 534 SMART ANK_2a 94 123 IPR002110 GO:0005515
Aed11g0904 534 Pfam Ankyrin repeat 162 186 IPR002110 GO:0005515
Aed11g0904 534 ProSiteProfiles Ankyrin repeat region circular profile. 162 183 - -
Aed11g0904 534 ProSiteProfiles Ankyrin repeat profile. 230 255 IPR002110 GO:0005515
Aed11g0904 534 Pfam Domain of unknown function 346 455 IPR026961 -
Aed11g0904 534 ProSiteProfiles Ankyrin repeat region circular profile. 230 255 - -
Aed11g0904 534 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 4 534 - -
Aed11g0904 534 Gene3D - 15 329 IPR036770 -
Aed11g0904 534 Pfam Ankyrin repeats (3 copies) 64 150 IPR002110 GO:0005515
Aed11g0904 534 Pfam Ankyrin repeats (3 copies) 194 259 IPR002110 GO:0005515
Aed11g0904 534 ProSiteProfiles Ankyrin repeat profile. 162 183 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0904 Aed-Chr11 14522409 14526638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0904 10 534 Miscellaneous Gene Families AT2G01680 66.163 0.0 701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0904 11 14522409 14526638 Aed11g0904 11 14522409 14526638 ECH