Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0895 ATGGGTTCCGAAGGATCCAGCGTCGTCGTTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAATTGGGGATGGAACTGTTAGCTATGGAATGGATGATGCTGATGACATATACATGCAGTCTTGGACTGGGACTATCATTGGCCCTCCTGGTACTGTTCATGAAGGACGTATCTACCAGTTGAAGTTGTTTTGTGGCAAGGATTATCCAGACAATCCTCCATCTGTTAGATTTCAAACAAGGATTAACATGACATGTGTCAATCAAGAAACTGGAATGGTTGAGCCACATTTGTTTCCTATGCTTGCTAACTGGAAACGCAATGAAGAAGCCAGGGTTGATCAAAAGGGTCTGGTGGTGAGATGTTGTATTGTGTAA 393 0.4351 MGSEGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPGTVHEGRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNQETGMVEPHLFPMLANWKRNEEARVDQKGLVVRCCIV 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0895 130 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 130 IPR000608 -
Aed11g0895 130 SMART ubc_7 14 129 - -
Aed11g0895 130 Pfam Ubiquitin-conjugating enzyme 41 100 IPR000608 -
Aed11g0895 130 Gene3D Ubiquitin Conjugating Enzyme 2 119 IPR016135 -
Aed11g0895 130 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 8 113 - -
Aed11g0895 130 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1A-LIKE 8 113 - -
Aed11g0895 130 SUPERFAMILY UBC-like 9 112 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0895 Aed-Chr11 14394110 14402714 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0895 11 14394110 14402714 Aed11g0895 11 14394110 14402714 ECH