Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0886 ATGTGCGTAATTTTCACAAGGGTGCGGTACAAAAGATCCCTGTCGGACACTGACTACAAGCTGGGACCCACCAGTATGTGTTTTTGCTCTGAAAATGGAGAGAGATTTTCTGGGTCTGAGTTCAAAAGAACCATTGGCTGTGGTTTCACAAACAGAGCAGTGGTAAAATGGCCCTTCATGAACAAAGTATCTGTCCATCCTCATTTGATGCCTTTCAATGCTCCTCAGAAGTCTGTCAATCATGATGGACAAGGTGGCATTCATTTTTTCCTGGCTCCATATCCTGTACAACACGAGGTGAATTCTGCAAACTGTCCTCATGATATGAAGATGTTTGCAGTTCCCAATCAAGCAATTTCAGTATCCATGGGACACCCACCGCTAAAGAATCATTTTGCATCTGTTGGTCAGAGTATGAATGGTTCTAGCACGAAGCAACCGCTGCTCGGGGGAATACCTGTTACAGTGCCTCATTCAGCTCTCCCCATTGTTGGTGAAACATGTGTGAAACCATCTGTACCTCCTCCTAAACTTACCATCTTCTATGCTGGCACTGTGAATGCACAAGCTATCATGTTGTTGGCTGGGAATAGCTTATCAGCTGCTTCGAACGCGGCACCACCTAATGTTCAGGCGCCCAGCTTGAAGTTGGCAGTAGGTGATGGTGTGCCTGTCAGTCAATCCATACCACCCTGCTCCGGTCTTTCAAGTCCTTTATCTGTTTCTTCACATACTGATGCACATTCAGGGAGTGGTTCAAGTAGCAATGACAAATTTCTCGCAGCTAAAGCATCGAAAGTGGAGACTCCGAAAGTAGTCAACACAACCAGCATGCTACCATCTGCTGTGCCACAGTCTCGCAAGGCATCATTGGCTCGATTTTTGGAGAAGCGCAAGGAAAGGGTGATGAATGCAGCACCATATAACCTCAACAAGAAGTCTGAGAATGTGCCACAGCAGAACACAATGGTTTCTAACATCACTACAAGCGCAGGTGCTGATGCAATTGCAATGTCAACCAAGCAAGGACCCCTTCTTATAGGAGACTACTTCAGATAA 1059 0.4599 MCVIFTRVRYKRSLSDTDYKLGPTSMCFCSENGERFSGSEFKRTIGCGFTNRAVVKWPFMNKVSVHPHLMPFNAPQKSVNHDGQGGIHFFLAPYPVQHEVNSANCPHDMKMFAVPNQAISVSMGHPPLKNHFASVGQSMNGSSTKQPLLGGIPVTVPHSALPIVGETCVKPSVPPPKLTIFYAGTVNAQAIMLLAGNSLSAASNAAPPNVQAPSLKLAVGDGVPVSQSIPPCSGLSSPLSVSSHTDAHSGSGSSSNDKFLAAKASKVETPKVVNTTSMLPSAVPQSRKASLARFLEKRKERVMNAAPYNLNKKSENVPQQNTMVSNITTSAGADAIAMSTKQGPLLIGDYFR 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0886 352 Pfam Jas motif 284 308 IPR018467 -
Aed11g0886 352 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 48 331 IPR040390 -
Aed11g0886 352 MobiDBLite consensus disorder prediction 234 257 - -
Aed11g0886 352 PANTHER PROTEIN TIFY 7 48 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0886 Aed-Chr11 14095864 14099837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0886 55 314 Tify Gene Family AT3G17860 35.000 1.05e-21 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed11g0886 Jas_motif 1.4e-12 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0886 11 14095864 14099837 Aed11g0886 11 14095864 14099837 ECH