Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02899 ATGACAACCACACTCAGAAGATCGAAGCGTAAGCATAATCTTGAGCCAGCACCAAAAATCACTGGAAAGAAGCTTCGGTCAAACCTCCCTCGCCGGCGACGGTGCCAGATCTCACCGGTGGTTATTGTTTCCACTAGATTCAATGCTTCCAGAGAAAATCCTCATTTCTCTGGAAAATCAATGGATTCTGATTCTTGCTCTGACGACTTTGCCGGCGGCGAAGCTTCGTGTAACTCGAGCAGAGCTTCCGCTGTTTTCGCCGGAAATGGAGGTTGCTCCAAATCGAGCGAGAAATTGCAATGCGAAATATCGAGAAATCGAAGATTCGGGAAGCAAAATGAAAGTGAAGTGTCGGAGTCTTCGTGTGTGGACTCCAATGACAGAGTTCGCGAACGGAGCAGGAGCTTGATTCTGAAGTTCAGAAGCGAAAAGGAGAGACGAAACGATGAATTCTCCGAAGCATGCACGAAATCTGAGATCACTTGCGAGGATGCAAAGTCCGAATTCTCTCAAGGTTCGAGAAACCACCGCGAGGATGATAGTAACTCTGTTGATTTGATAGCAAAATCGAAGATCAATCAAAGTACGAATAGCTCCGATCTCAATTGCACGGAGCAATTGCGATTCTCATATTCCAACGAAGACGAAGATGACGAAGACGATGAGTCAGAGTACTATCCGAGTCAGGGAACTGTGCTCTCTGATCTTCGCTCAGAGATGTTCAGCTTCCCTGAGTGTTCGGAACTTGAGCTTTCTGATTACACTCCGTCGCTATTCATTGATTCAGGAAGCCAATTCTCGCAGGGATCCGTTGGTGAAACTCCTTCTCCAACTCACTCGTTATTTCTTCAGTTCCGTAACGAGTTCACCACGCTAATTATAACTTCTCCATTCAACAATAATTCTTCCAGCGTCAAAGATGAGGTCGTTCCTATTCATTCCAAGTTTGTGAAGTTCGATGATTTGGACGAAGAAGAAAGCTACCTGATGCTGAGAGAGAGGGAGAGGAAGCAAGTTCTTCTGTGGAATTATACAGATAGCTATTTTTCTACCACTGAATTCGGGGACCTCGTGATTCAGCAACGCTCTCAAATGGTACACTGGATCGTTGAGCAATCTTATCGAAAACAGCTTCGGCAAGAGACGATGTTTCTTGGAGTCAGCCTCCTTGACCGTTTCTTAAGCAAAGGATATTTTAAAGTCAAGAGAAACCTTCAGATTGTTGGGATCGCTTGCCTCACGTTAGCCACGAGGATTGAAGAAAACCAGCAATATAGCAGAGTGGAGCAAAAGAATTTTTATATTGGAAGTAATGTGTACAGTAGATGCGAGGTGGTTGCTATGGAATGGGTGGTGCAGGAAGTGCTTAAGTTCCAGTGTTTCATTCCGACCATCTACAATTTCTTGTGGTTCTACTTAAAAGCTGCTAAAGCTAATGCAGCTGTGGAGAGGAGGGTCAAGTCGCTGGCAGTTCTGGTACTATCAGCTGAGGAGCAGCTATGCTACTGGCCCTCAACAGTTGCTGCAGCAATTGTAATCCTGGCTTGTCTCGAAGTGGATCAAAATGCCTTCCACACAGTCATAGGGATCCACGTAAGATCAAAAGATGAGAATTTGCACGAATGCATGCAGAGCCTACAGTGGTTAATACGCTATCTATGA 1662 0.4525 MTTTLRRSKRKHNLEPAPKITGKKLRSNLPRRRRCQISPVVIVSTRFNASRENPHFSGKSMDSDSCSDDFAGGEASCNSSRASAVFAGNGGCSKSSEKLQCEISRNRRFGKQNESEVSESSCVDSNDRVRERSRSLILKFRSEKERRNDEFSEACTKSEITCEDAKSEFSQGSRNHREDDSNSVDLIAKSKINQSTNSSDLNCTEQLRFSYSNEDEDDEDDESEYYPSQGTVLSDLRSEMFSFPECSELELSDYTPSLFIDSGSQFSQGSVGETPSPTHSLFLQFRNEFTTLIITSPFNNNSSSVKDEVVPIHSKFVKFDDLDEEESYLMLRERERKQVLLWNYTDSYFSTTEFGDLVIQQRSQMVHWIVEQSYRKQLRQETMFLGVSLLDRFLSKGYFKVKRNLQIVGIACLTLATRIEENQQYSRVEQKNFYIGSNVYSRCEVVAMEWVVQEVLKFQCFIPTIYNFLWFYLKAAKANAAVERRVKSLAVLVLSAEEQLCYWPSTVAAAIVILACLEVDQNAFHTVIGIHVRSKDENLHECMQSLQWLIRYL 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02899 553 SMART cyclin_7 367 454 IPR013763 -
Adu10g02899 553 Pfam Cyclin, C-terminal domain 463 547 IPR004367 -
Adu10g02899 553 PANTHER CYCLIN-SDS 1 544 - -
Adu10g02899 553 CDD CYCLIN 462 516 IPR013763 -
Adu10g02899 553 ProSitePatterns Cyclins signature. 362 393 IPR006671 -
Adu10g02899 553 Gene3D - 340 454 - -
Adu10g02899 553 MobiDBLite consensus disorder prediction 1 31 - -
Adu10g02899 553 SUPERFAMILY Cyclin-like 462 550 IPR036915 -
Adu10g02899 553 CDD CYCLIN 362 449 IPR013763 -
Adu10g02899 553 PANTHER CYCLINS 1 544 IPR039361 -
Adu10g02899 553 PIRSF Cyclin_A_B_D_E 46 243 IPR039361 -
Adu10g02899 553 PIRSF Cyclin_A_B_D_E 325 551 IPR039361 -
Adu10g02899 553 Pfam Cyclin, N-terminal domain 357 459 IPR006671 -
Adu10g02899 553 Gene3D - 455 552 - -
Adu10g02899 553 SUPERFAMILY Cyclin-like 322 459 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02899 Adu-Chr10 105414868 105420151 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02899 356 522 Core Cell Cycle Gene Families AT5G25380 35.465 4.57e-21 94.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g02899 10 105414868 105420151 Adu10g02899 10 105414868 105420151 ECH