Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00742 ATGGTCTTCCACTCGTTCGTGGCTTCCCTGTTCGTCCTGTCCGAACCCCTTGCTCGTTCTATTCTATCTCGGCTCGACGTCCATCCTTCCGCGGCTTCTCTGTTCGTGTTGCTCTCGCTGTCGTCCTACTATCTGTCGCGCTCAACCCCTGTCGAAGGACGTGATGCTTTTCCAGCAGGTCTAAGAGTCCTTGTTGTTGATGATGACCCAACATGGCTTAGGATCCTTGAAAAGATGCTCAAGAAGTGTTCCTATGAAGTGACTACATGTTGTTTGGCGAGGCATGCTCTACACTTGCTTCGCGAAAGGAAAGACGGGTATGATATAGTGATCAGCGATGTGAACATGCCTGACATGGATGGATTCAAACTTCTAGAGCATGTTGGACTTGAGATGGATCTTCCTGTGATTATGATGTCTGTTGATGGAGAAACAAGCAGGGTGATGAAAGGTGTTCAACACGGAGCATGCGATTATCTGCTTAAGCCTATAAGGATGAAGGAACTGCGAAACATATGGCAGCATGTCTTTAGGAAAAGGATACACGAGGCGAGAGAATTCGAGAGTTTTGAAGGTTTCGAGAGCATTCACCTGATGAGAAACGGATTGGAGCAATGCGATGATGGGAACCTGTTTGCCCTTGAAGACATGACCTCAACTAAGAAAAGAAAAGATGCAGATAACAAACACGATGACAGAGAATTGATAGATCCATCATCCACAAAGAAAGCTAGAGTAGTTTGGTCTGTGGATCTTCACCAGAAGTTTGTTAAAGCAGTGAATCAAATTGGATTTGATAAAGTTGGTCCAAAGAAAATACTAGATCTCATGAATGTTCCTTGGCTGACTAGAGAAAATGTTGCAAGCCACTTGCAGAAGTATCGGCTTTACCTAAGCCGGCTTCAAAAAGAGAACGATCTGAAGTCGTCTTCCTCAATCGGAATGAACCCGGATTTAGCCGCAACAGATCTAGGGAGTTTTGTTGGAGTTCAGAACTCAGTGAGCAAGAAACAAAATGATGTTTCAATTGACAGCTGCAGTTATTCAGAAGGAGCACTGCAACTTCAGAACATGGAAACCAAAACTCATGAAGGTAGCAGTGATCCAAACGGAACTATTTCTCCGCCTGCCACTACAGAAAAAGGAAGAACTATGATCAGAAACTTTGTTTCCGAGAAAAAGATGAGAAAGAACCAACCTTTTGACTCTCTTGAGCCGGAAGGAAACCACACAGCAGTAATTGATTGCTCCATTCCAACACAATTCTCTTGGAATGAAGTTCCAGAAATTCAACTCAAAGATCACAAGCCACTTGTTCAGTTAGAGGGTAACTTAAGCCACAAGTTTCCAGTAACAGGTAAGAAGCACCAAATCCAAGTTGATCATCAATCACCATCAATTGGTTCGATTGGTTCTCCATCTTTGACAGGGGAGGAGGTCACGGCATGCATCAAAACAAAACCTTTGTGTGCAGATTACAAGTGTGAATACAAGAGTTCCGTGAGTTCGATAGGATCGGCAGTTGACAACAACACGTTCCCTATTGAACCAGGAAGCCTTATGATGAATGATCCATCAACAGCACCAATTTCAACTACAAATTCGGGATTGAAAACACAAGCATCTAACCTCAACAGCATTTCGGATATGGAATTTTGCCAGAGAAACCTACTTTTGGATGCAGTTTCGCTACCGTTGGACGATGATCTGCATTTTAATTGGCTACATGGGGAATGCTCTAACATCAACTTCAGCCTGCAGAACATAGGGTATTATGATCCAGGGCTTATTGCAGAAATTCCAACTCATTACTATGATTCAGCAGCAGATTATGCAGTCATAGATCAAGGTCTATTCATATCATGA 1866 0.4325 MVFHSFVASLFVLSEPLARSILSRLDVHPSAASLFVLLSLSSYYLSRSTPVEGRDAFPAGLRVLVVDDDPTWLRILEKMLKKCSYEVTTCCLARHALHLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKRIHEAREFESFEGFESIHLMRNGLEQCDDGNLFALEDMTSTKKRKDADNKHDDRELIDPSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLQKENDLKSSSSIGMNPDLAATDLGSFVGVQNSVSKKQNDVSIDSCSYSEGALQLQNMETKTHEGSSDPNGTISPPATTEKGRTMIRNFVSEKKMRKNQPFDSLEPEGNHTAVIDCSIPTQFSWNEVPEIQLKDHKPLVQLEGNLSHKFPVTGKKHQIQVDHQSPSIGSIGSPSLTGEEVTACIKTKPLCADYKCEYKSSVSSIGSAVDNNTFPIEPGSLMMNDPSTAPISTTNSGLKTQASNLNSISDMEFCQRNLLLDAVSLPLDDDLHFNWLHGECSNINFSLQNIGYYDPGLIAEIPTHYYDSAADYAVIDQGLFIS 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00742 621 Gene3D - 243 302 - -
Adu10g00742 621 PANTHER TWO-COMPONENT RESPONSE REGULATOR 39 598 - -
Adu10g00742 621 Pfam Response regulator receiver domain 63 172 IPR001789 GO:0000160
Adu10g00742 621 PANTHER TWO-COMPONENT RESPONSE REGULATOR 39 598 IPR045279 GO:0009736
Adu10g00742 621 ProSiteProfiles Response regulatory domain profile. 62 177 IPR001789 GO:0000160
Adu10g00742 621 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 243 296 IPR006447 GO:0003677
Adu10g00742 621 CDD REC_typeB_ARR-like 63 177 - -
Adu10g00742 621 Pfam Myb-like DNA-binding domain 245 295 IPR001005 -
Adu10g00742 621 SUPERFAMILY Homeodomain-like 241 300 IPR009057 -
Adu10g00742 621 Gene3D - 61 242 - -
Adu10g00742 621 SUPERFAMILY CheY-like 60 189 IPR011006 -
Adu10g00742 621 SMART REC_2 61 173 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00742 Adu-Chr10 9427799 9435185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00742 51 301 Response Regulator Gene Family AT2G25180 56.299 1.27e-82 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Adu10g00742 Response_reg 3.3e-24 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00742 10 9427799 9435185 Adu10g00742 10 9427799 9435185 ECH
Adu10g00742 10 9427799 9435185 Adu03g04498 03 134324981 134327256 PCT