Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00245 ATGGCTCCCAGGGATAAGACGGCTGCCGTTAAGGTTAACGGCAAAGCTAGCGCCGGCGTTAAAGAGGTACATTTTAGGGGTGTTAGGAAGAGGCCATGGGGAAGGTACGCTGCTGAGATCAGAGATCCAGGCAAGAAGAGCCGCGTTTGGCTCGGCACCTTCGACACCGCCGAGGACGCAGCGCGTGCATACGACGCCGCCGCCCGAGAGTTCCGTGGCCCAAAGGCTAAGACCAACTTCCCCTTTCCTGATTCCGACGACAACAACAATAACAACATCGTCGTCGTTAAGAACAACAACCGCAGCCCCAGCCAGAGCAGCACCGTCGAATCTTCCAGCCGGGACCGCGACTCCTACTCCGCCGCTGCCACCGCAGCAGCTGATTCGTCGCCCTTAGACCTTAACTTGGCCCCCGCTGGAGCCGGATTCTCCGGATCCATTCGGTTCCCATTCCAGCAGCCGTTCGCTGTGTTTCCCTGCCGGATGCCGGCGGCGAAGCAGGCTCTGTACCTCGACGCGGTGCTGCGCGCCGGCATGGTTGGTCACGGCCAGTTCGGTTTTGGTTATAACCGTCCCGCGGCGGCGGGAGCGCAGAGTGACTCGGACTCTTCGTCGGTGATTGATCTGAACCAGCACGACGGCGATGTCGCTAAGAATCACGGAAGAGGCTTAGTTCTAGACCTGAACGAACCTCCTCCACAAGAGATGGCTTGA 714 0.5952 MAPRDKTAAVKVNGKASAGVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEDAARAYDAAAREFRGPKAKTNFPFPDSDDNNNNNIVVVKNNNRSPSQSSTVESSSRDRDSYSAAATAAADSSPLDLNLAPAGAGFSGSIRFPFQQPFAVFPCRMPAAKQALYLDAVLRAGMVGHGQFGFGYNRPAAAGAQSDSDSSSVIDLNQHDGDVAKNHGRGLVLDLNEPPPQEMA 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00245 237 CDD AP2 24 81 IPR001471 GO:0003700|GO:0006355
Adu10g00245 237 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
Adu10g00245 237 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
Adu10g00245 237 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 217 - -
Adu10g00245 237 MobiDBLite consensus disorder prediction 82 120 - -
Adu10g00245 237 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Adu10g00245 237 MobiDBLite consensus disorder prediction 197 237 - -
Adu10g00245 237 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Adu10g00245 237 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Adu10g00245 237 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Adu10g00245 237 MobiDBLite consensus disorder prediction 74 120 - -
Adu10g00245 237 Gene3D AP2/ERF domain 23 82 IPR036955 GO:0003700|GO:0006355
Adu10g00245 237 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4-LIKE 1 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00245 Adu-Chr10 2997784 2999375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00245 21 184 AP2-EREBP Transcription Factor Family AT3G15210 48.485 2.50e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Adu10g00245 AP2 7e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00245 10 2997784 2999375 Adu10g00245 10 2997784 2999375 ECH
Adu08g02048 08 34272758 34277569 Adu10g00245 10 2997784 2999375 ECH
Adu03g01803 03 30949836 30950632 Adu10g00245 10 2997784 2999375 ECH